Methylobacterium sp. NMS14P: LOK46_04030
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Entry
LOK46_04030 CDS
T10783
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mens Methylobacterium sp. NMS14P
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mens03032
]
LOK46_04030
03400 DNA repair and recombination proteins [BR:
mens03400
]
LOK46_04030
Enzymes [BR:
mens01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LOK46_04030
DNA replication proteins [BR:
mens03032
]
Prokaryotic type
DNA Topoisomerases
LOK46_04030
DNA repair and recombination proteins [BR:
mens03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOK46_04030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WCS26015
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All DBs
Position
complement(854659..855873)
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AA seq
404 aa
AA seq
DB search
MACVETAESGGDLRAAAEEAGLVYVDDGRPGLTRRRSGTGFRYLDAKGAPVRDQAVLARI
RSLAIPPAYTDVWICPRRNGHIQATGRDAKGRKQYRYHPDFRQAREANKFSRIMAFADAL
PGIRRRVDADMKRPGLSRDKVLATVVHLLETTLIRVGNDDYARTNKSYGLTTLRDPHVRI
EGSALSFRFKGKSGKTWDVSLKDRRVARIVKACQDLPGQELFQYLDPDGTQRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFETFDSEAGAKRNIRAAIENVAGRLGNTP
TVCRKCYIHPQILDCYLEGGLLLQVKDAVESELSEDLSSLRPEEAAVLGLLQARLSAVED
TAKAGGRIKPAGARGRGTKAPERSKSGAAAAKRASGAGKAAAAA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtgtcgagacggcggagagcggcggagacctccgcgccgcggccgaggaggcc
gggctcgtctacgtcgatgacggccggcccggactgacccgccgccgcagcggcaccggc
ttccgctacctcgacgcgaagggcgcgccggtgcgcgaccaggcggtgctggcccgcatc
cgcagcctcgcgatcccgcccgcctacacggatgtctggatctgcccccgccgcaacggc
cacatccaggcgacgggccgcgacgccaaggggcgcaagcagtaccgctatcaccccgac
ttccggcaggcgcgggaggccaacaagttctcgcggatcatggccttcgcggacgcgctg
ccgggcatccgccggcgcgtcgacgccgacatgaagcggccgggcctctcgcgcgacaag
gtgctggccaccgtggtccacctgctcgagaccacgctgatccgggtcggcaacgacgac
tacgcgcggaccaacaagagctacggcctgacgactctgcgcgatccccacgtccggatc
gaggggtcggccctgtcgttccgcttcaagggcaagagcggcaagacctgggacgtgtcg
ctgaaggaccggcgggtcgcccggatcgtcaaggcctgccaggacctgccgggccaggag
ctgttccagtatctggacccggacggcacccagcgcgacgtcacctcctcggacgtgaac
gcgtacctgcgcgagatcaccggcgaggacttcaccgcgaaggatttccgcacctgggcc
ggcacggttctggcggcgctggcgctgcgggagttcgagaccttcgacagcgaggcgggg
gccaagcgcaacatccgcgcggccatcgagaacgtcgcgggccgcctcggcaacacgccg
acggtctgccgcaagtgctacatccacccgcagatcctcgactgctacctggagggcggc
ctgctcctgcaagtgaaggatgcggtcgagtcggagctcagcgaggacctctccagcctc
cggcccgaggaggcggcggtgctgggcctgctgcaggcgcgcctctccgccgtcgaggac
accgccaaggccggcgggcggatcaagccggcgggcgcgcggggccgggggacgaaggcg
cccgagcggtcgaagagcggagcggcagcggccaagcgggcgtccggagccgggaaggcg
gccgcggccgcttag
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