Methylobacterium sp. NMS14P: LOK46_04295
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Entry
LOK46_04295 CDS
T10783
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOK46_04295 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mens03400
]
LOK46_04295 (uvrB)
DNA repair and recombination proteins [BR:
mens03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOK46_04295 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOK46_04295 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
UB2H
MutS_II
Microtub_bd
Kinesin
DUF2963
Motif
Other DBs
NCBI-ProteinID:
WCS26066
LinkDB
All DBs
Position
908364..911117
Genome browser
AA seq
917 aa
AA seq
DB search
MPAPKKPRAASVTATSAKASKPELKPLDTYLAELLNPALNRNRPAVVEPPPEAPARPGRK
AGGGKGVPKDRAAKAATRRAEIARDGFAEAPQAGYALGDAADVDPRLAQALGLTPPEDGP
VPEGADLPDPGGDGGASATVSALERLLTEGNPLFKDGQTWTPHRPERPQKSEGGVRFTLK
SEFTPAGDQPKAIAELVGGVKALERDQVLLGVTGSGKTFTMAKIIEETQRPALILAPNKT
LAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHAATR
ALLERDDVIIVASVSCIYGIGSVETYTAMSFTVSLGERIEQRQLIADLVALQYKRIQSDF
ARGTFRVRGDSIELWPAHLEDRGWRIGLFGDEVESIVEFDPLTGKTISELKFVKVYANSH
YVTPRPTLQQAIKGIKHELKGRIEELTKMGRLIEAQRIDQRCTFDIEMIEATGACNGIEN
YSRYLTGRKPGEPPPTLFEYLPDNALVFTDESHVTVPQIGGMYRGDFRRKATLAEYGFRL
PSCLDNRPLRFEEWDAMRPMTVHVSATPGKWEMEQTGGVFAEQVIRPTGLVDPVIEIRPA
RSQVDDLLGEVREVAQAGYRTLVTTLTKRMAEDLTEYLHENSVRVRYMHSDIDTLERIEI
IRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNADA
RCILYADNITGSMERAMAETERRRAKQLAYNEEHGITPQSVKRGIADILSSVFERDHVQV
DTGLAKDAITVGHNLKAVMADLEKRMRAAAADLDFEEAARLRDELKRLQATELLVSDDPM
ARQSDVEREAGKFGRKAPRGGSRIARPDLDNMGPGTDRELPVGGAAPVWQERPKPRSTQG
LGGQKPKYKGGGGRRRG
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaccgaagaaaccgcgcgccgcctccgtgacggccacgtccgccaaggcgtcg
aagcccgagctgaagcccctggacacctatctggcggagctcctgaacccggcgctcaac
cggaaccgtccggccgtcgtcgagccgccccccgaggcgcccgcgcggcccggccgcaag
gcgggcggcgggaagggcgttccgaaggaccgggccgccaaggccgcgacccggagggcc
gagatcgcccgcgacggcttcgcggaggcgccgcaggccggctacgcgctcggcgacgcc
gcggatgtcgacccgcgcctggcgcaagcgctcggcctcacgccgcccgaggacggcccg
gtgccggaaggcgccgacctgccggatcccggcggcgacggcggcgcctcggcgacggtc
tcggccctggagcggctgctcaccgagggcaacccgctgttcaaggacggccagacctgg
acgccgcaccgtccggagcgcccgcagaaatccgagggcggcgtccggttcacgctgaaa
tccgagttcacgccggccggcgaccagccgaaggccatcgccgaactggtcggcggcgtg
aaggcgctggagcgcgaccaggtgctgctgggcgtcaccggctcgggcaagaccttcacg
atggccaagatcatcgaggagacgcagcgcccggcgctgatcctcgcgcccaacaagacg
ctcgccgcgcagctctacggcgagttcaaggccttcttccccgacaatgcggtcgagtac
ttcgtctcctactacgactactaccagcccgaggcctacgtcccgcgctccgacacgttc
atcgagaaggaatcctcgatcaacgagcagatcgaccggatgcgccacgccgccacccgc
gccctgctggagcgcgacgacgtgatcatcgtcgcctcggtctcgtgcatctacggtatc
ggctcggtcgagacctacacggcgatgtcgttcacggtctccctcggcgagcggatcgag
cagcgccagctgatcgccgacctcgtggcgctccagtacaagcgcatccagtcggatttc
gcccgcggcactttccgggtccgcggcgattcgatcgagctgtggccggcccacttggaa
gaccgcggctggcggatcggcctgttcggcgacgaggtcgagagcatcgtcgagttcgac
ccgctcaccggcaagacgatctccgagctgaagttcgtgaaggtctacgccaactcgcac
tacgtgacgccgcgcccgacgctgcagcaggcgatcaagggcatcaagcacgagctgaag
ggccggatcgaggagctgaccaagatgggccgcctcatcgaggcgcagcgcatcgaccag
cgctgcaccttcgacatcgagatgatcgaggccaccggcgcctgcaacggcatcgagaac
tactcccgctacctcaccggccggaagcccggcgagccgccgccgaccctgttcgagtac
ctgcccgacaacgccctggtgttcaccgacgagagccacgtcaccgtgccgcagatcggc
ggcatgtaccggggcgacttccgccgcaaggcgacgctggccgagtacggcttccggctg
ccctcctgcctggacaaccgcccgctccgcttcgaggagtgggacgcgatgcggccgatg
acggtccacgtctcggcgacgcccggcaagtgggagatggagcagaccggcggcgtcttc
gccgagcaggtgatccgcccgaccgggctggtcgacccggtgatcgagatccgcccggcc
cgcagccaggtcgacgacctgctgggcgaggtccgcgaggtggcgcaggccggctaccgg
acgctcgtgacgacgctgaccaagcgcatggccgaggacctcaccgagtacctgcacgag
aacagcgtccgggtgcgctacatgcactccgacatcgacacgctggagcggatcgagatc
atccgcgacctgcggctcggcgccttcgacgtgctgatcggcatcaacctgctgcgcgag
ggcctcgacatcccggaatgcgccctggtggcgatcctcgacgccgacaaggagggcttc
ctgcgctcggagacgtcgctgatccagaccatcggccgcgccgcccgcaacgccgacgcg
cgctgcatcctgtacgccgacaacatcaccggctcgatggagcgggcgatggccgagaca
gagcgccgccgcgccaagcagctcgcctacaacgaggagcacgggatcacgccgcagagc
gtgaagcgcggcatcgccgacatcctgagcagcgtgttcgagcgcgaccacgtgcaggtc
gacaccgggctggccaaggacgccatcacggtgggccacaacctcaaggccgtgatggcg
gacctcgagaagcgcatgcgggcggccgccgccgacctcgacttcgaggaggcggcgcgg
ctgcgcgacgagctgaagcggctccaggcgaccgagctgctggtctccgacgacccgatg
gcgcggcagagcgacgtggagcgcgaggcggggaagttcggccggaaggcgccgcgaggg
ggcagccgcatcgccaggcccgacctcgacaacatgggcccggggacggaccgggagctg
ccggtgggcggcgcggcgccggtctggcaggagcggccgaagccgcgctcgacgcagggg
ctcggcggtcagaagcccaagtacaagggcggcggcggtcggcggcggggctga
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