Methylobacterium sp. NMS14P: LOK46_04965
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Entry
LOK46_04965 CDS
T10783
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOK46_04965 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mens03019
]
LOK46_04965 (pnp)
03016 Transfer RNA biogenesis [BR:
mens03016
]
LOK46_04965 (pnp)
Enzymes [BR:
mens01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LOK46_04965 (pnp)
Messenger RNA biogenesis [BR:
mens03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LOK46_04965 (pnp)
Transfer RNA biogenesis [BR:
mens03016
]
Prokaryotic type
tRNA degradation factors
LOK46_04965 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
DUF7357
OB_RRP5_4th
PHB_acc_N
Motif
Other DBs
NCBI-ProteinID:
WCS26189
LinkDB
All DBs
Position
complement(1046638..1048857)
Genome browser
AA seq
739 aa
AA seq
DB search
MFDVQREELMWGDRKLVLETGKVARQADGAVIATYGETSVLATVVAAKEPKPGIDFMPLT
VNYQERAYAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFIEGWRNDTQVVVTVLTH
DLENDPDIVAMVAASAALTLSGVPFMGPIGGARVGYINGGYRLNPLVTETKEESSLDLVV
AGTQDAVLMVESEAKELSEDVMLGAVMFGHKHFQPVIEAIIRLAEKAAKEPRDFKAPENA
DVEKAVLEVCEAELRAAYTKTVKQERYAAVDAVKAKVMAALCPEGAEKYPAEKVKAAFKE
AQSKVVRWNILDSGARIDGRDVKTVRSILSEVGVLPRAHGSALFTRGETQALVVATLGTG
EDEQFIDALEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPVLPPAH
EFPYTIRVVSEITESNGSSSMASVCGGSLSLMDAGVPLRRPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTDEGVTSLQMDIKIAGITEEIMRVALDQAKDGRAHILAEMAK
ALTAARPELGEYAPRIETMQIPTDKIRDVIGTGGKVIREIVEKTGAKINIEDTGVVKIAS
ADGKAIKAAYNWIRSIVAEPEVGVIYDGTIVKCMEFGAFVNFFGAKDGLVHISELAAQRV
AKVQDVVKEGDKVKVKFLGQDDRGKIRLSMKVVDQQTGEDITDKIKAQRDADRAERGEEP
REPREGGRHRGERRREAGE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgttcaacgcgaagagctgatgtggggcgaccgcaagctcgtcctggagacc
ggcaaggtcgcgcgccaggccgacggtgccgtcatcgccacctacggtgagacctcggtg
ctcgcgaccgtggtcgccgccaaggagccgaagcccggcatcgacttcatgccgctcacc
gtgaactaccaggagcgcgcctacgccgccggccgcatcccgggcggctacttcaagcgc
gagggccggccctccgagaaggagaccctggtctcccgcctgatcgaccgcccgatccgc
ccgctcttcatcgagggctggcgcaacgacacgcaggtcgtcgtcactgtcctgacccac
gacctcgagaacgatcccgacatcgtcgcgatggtcgcggcctccgcggccctgaccctg
tcgggcgtgccgttcatgggcccgatcggcggcgcccgcgtcggctacatcaacggcggc
taccggctgaacccgctggtcaccgagaccaaggaagagtccagcctcgacctcgtcgtc
gccggcacgcaggacgcggtgctgatggtcgagtcggaggccaaggagctctccgaggac
gtgatgctcggcgccgtgatgttcggccacaagcacttccagccggtgatcgaggcgatc
atccgcctggccgagaaggccgccaaggagccgcgcgacttcaaggcccccgagaacgcc
gacgtcgagaaggccgtcctcgaggtctgcgaggcggagctgcgcgccgcctacaccaag
accgtcaagcaggagcgctacgccgccgtcgacgccgtgaaggcgaaggtgatggccgcc
ctctgccccgagggcgccgagaagtacccggccgagaaggtcaaggcggccttcaaggag
gcccagtcgaaggtggtccgctggaacatcctcgacagcggcgcccgcatcgacggccgc
gacgtgaagacggtccgctcgatcctctccgaggtcggcgtgctgccccgcgcccacggc
tcggccctgttcacccgcggcgagacccaggcgctcgtcgtggcgacgctgggcaccggc
gaggacgagcagttcatcgacgcgctggaaggcacctacaaggagcgcttcctgctccac
tacaacttccctccctacagcgtcggtgagaccggccggatgggctcgccgggccgtcgc
gagatcggccacggcaagctcgcttggcgggcgatccgtccggtcctgccgccggcccac
gagttcccctacacgatccgcgtcgtgtcggagatcaccgagtccaacggctcgtcctcg
atggcgtccgtctgcggcggctcgctgtcgctgatggatgccggcgtcccgctgcgccgt
ccggtggccggcatcgccatgggcctcatcctcgagggtgagcgcttcgcggtcctgtcc
gacatcctgggcgacgaggatcacctcggcgacatggacttcaaggtggccggcacggac
gagggcgtgacctcgctccagatggacatcaagatcgccggcattaccgaggagatcatg
cgggtcgccctcgaccaggcgaaggacgggcgcgcccacatcctcgccgagatggccaag
gccctgaccgctgcccgtccggagctgggcgagtacgcgccgcgcatcgagacgatgcag
atcccgacggacaagatccgcgacgtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaagatcaacatcgaggataccggcgtcgtgaagatcgcctct
gccgacggcaaggcgatcaaggcagcctacaactggatccgctcgatcgtggcggagccg
gaggtcggcgtgatctacgacggcacgatcgtgaagtgcatggagttcggtgccttcgtg
aacttcttcggcgcgaaggacggcctggtccacatctcggagctcgccgcccagcgggtc
gccaaggttcaggacgtcgtcaaggaaggcgacaaggtcaaggtgaagttcctcggtcag
gatgaccgcggcaagatccgcctgtccatgaaggtcgtcgaccagcagacgggcgaggac
atcaccgacaagatcaaggcgcagcgcgacgccgaccgggccgagcgcggcgaggagccg
cgcgagccccgcgagggcggccgccatcgcggcgagcgccgccgcgaggccggcgagtaa
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