Methylobacterium sp. NMS14P: LOK46_06690
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Entry
LOK46_06690 CDS
T10783
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOK46_06690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mens03400
]
LOK46_06690
Enzymes [BR:
mens01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LOK46_06690
DNA repair and recombination proteins [BR:
mens03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOK46_06690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
HHH_2
Helicase_RecD
HHH
PIF1
HHH_3
AAA_22
AAA_16
UvrD-helicase
TrwB_AAD_bind
nSTAND3
NTPase_1
HerA_C
DUF4314
DEAD
MeaB
CbiA
T2SSE
Glyco_hydro_39
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WCS26520
LinkDB
All DBs
Position
complement(1417251..1419452)
Genome browser
AA seq
733 aa
AA seq
DB search
MTERGRPQQIERGQPVEALAGTIERVTFHSPETGFCVIKVQARGKRDLVPVIGHAPAISA
GEWITATGIWHTDRQHGLQFKADTLKVTPPTGTEGIEKYLASGHMRGIGPAMAKRIVAAF
GEGTFEIIEAEPGRLTEVEGIGPKRAARIVAGWAQQKAVREIMLFLHAHGVGTARAVRIF
KTYGHEAIAVMTEDPYRLARDIRGIGFKTADAIAMKLGLTIEAPQRLRAGISFALQTATD
AGHCALPVAELVALAVELLGVEAPLIRSALLDVLETGEVVQDIVGDKACIFLAGLHAAER
AIAERLRRRAQGTPPWPEIDLTRALPWVAEKTGKTLSPSQEAAVRLVLGTKLAVVTGGPG
VGKTSTLDTILRILRAKGVRVLLAAPTGRAAKRMSEQTGLEAKTLHRLLEIDPKHGGFSR
NEDNPLPCDLLVIDETSMVDVPLMNALTKAVPDQAALLLVGDVDQLPSVGPGQVLADVIG
SGAVPVARLTEVFRQAAESRIVVNAHRINAGKMPEAAPRGTESDFHWIEIDEPEPAVQAL
IEVVTRRIPARYGLDPVRDVQVLTPMQRGVLGARNLNHELQAVLNPNPPISVERFGWRFS
PGDRVMESQNDYDREVFNGDLGTVARIDDDEGAVIVEFEGREVIYPYGELDTLVPAYATT
IHKSQGSEYPAVVIPLAMQHWTMLARNLLYTGVTRGKRLVVLLGQRKAVAIAVRGGTMKP
RWTKLREWLSQRP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcgggggcgaccgcagcaaatcgaacgcggtcagcctgtcgaggcgctcgct
ggcacgattgagcgcgtcaccttccacagtccggagaccggcttctgtgtgatcaaggtc
caggcgcgcggcaagcgcgacctcgtgcctgtgataggccacgcacccgcgatcagcgct
ggcgagtggatcaccgcgaccggcatctggcacacggaccgccagcacggcctgcagttc
aaggctgataccctcaaggtcacgccgcctaccggaacggagggaatcgagaagtacctc
gcttccggccacatgcgcggcatcggccccgctatggccaagcgcatcgtcgctgccttt
ggggaaggcaccttcgagatcattgaggctgagccgggccgcctcactgaggtagagggc
attggacccaagcgcgccgcccgcatcgtcgccggatgggctcagcagaaggccgtgcgc
gagatcatgctgttcctgcacgcccacggcgtcgggacggcccgggcggtgcgcatcttc
aagacctacggccacgaggcgatcgcggtcatgaccgaggatccctaccgtcttgccagg
gacatccggggcatcggcttcaagaccgctgacgccatcgcgatgaagctcggcctgact
atagaggcgccgcaacgcctgcgggccgggatctcgttcgccctgcagactgccacggat
gcgggccactgcgccctgccggtggctgagctcgtagcgctcgcggtcgagctcctcggt
gtagaagcgccgctgatccgctcggcactcctcgatgtgctggagaccggcgaggtcgtc
caggacatcgtcggcgacaaggcctgcatcttcctcgccggcctgcacgccgccgagcgc
gccatcgccgagcggctcaggcgccgcgcgcagggaaccccgccttggccggagatcgac
ctcacccgggcgctgccttgggtggcggaaaagacgggcaagacgctctcgccctcgcag
gaggccgccgtgcgcctcgtgctcggtacgaagctcgcggtggtcactggtggcccaggc
gtgggcaagacctcaaccctcgacacgatcctgcgtatcctgcgcgccaagggtgtgcgg
gttctgctcgcagcgcccactggccgggccgccaagcggatgagcgagcagaccgggctg
gaggccaagaccctgcatcgccttctcgagattgaccccaagcacggcggtttctcgcgc
aacgaggataaccccctcccctgcgatctgctcgtcatcgacgagacctcgatggtcgac
gtgccgctgatgaacgcgctgacgaaggcggtgccggaccaagcggcgttgctcctcgtt
ggcgatgtcgatcagctgccctcggtcgggcccggtcaggtgctggccgacgtgatcggc
tccggcgctgtgccggtggcgcggctcacagaggtctttcggcaggcggccgagagccgg
atcgtggtcaacgctcaccggataaacgcgggtaagatgcccgaggcggcaccgcgcggc
actgagagtgacttccactggatcgagatcgacgaacccgagccggccgtgcaggcgctg
atcgaggtggtgacgcgtcggattcccgctcggtacggcctcgatccggtccgggacgta
caggtgctcaccccgatgcagcgcggcgtgctgggcgcgcgcaacctcaaccacgaactt
caggcggtcctaaacccgaacccgccgatctcggtggagcggttcggctggcgcttctcg
cccggcgatcgagtcatggagagccagaacgactacgaccgggaggtgttcaacggcgac
ctgggcaccgtggctcgcatcgatgacgacgagggcgcggtgatcgtcgagttcgagggg
cgggaggtgatctacccttatggcgaactcgacacgctggtgccggcctacgccacgacc
atccacaagtcccagggctcggaataccccgcggtagtgatcccgctggccatgcagcac
tggacgatgctagcgcgcaacctcctctacacaggcgtgacgcgcggcaagcgcctagtg
gtgctcctcgggcaacggaaggcagttgccatcgcggtccgcggtggcacgatgaagcct
cgttggacgaagctgcgggagtggctgtcgcagcgcccttga
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