Methylobacterium sp. NMS14P: LOK46_11030
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Entry
LOK46_11030 CDS
T10783
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03030
DNA replication
mens03430
Mismatch repair
mens03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOK46_11030 (dnaE)
03430 Mismatch repair
LOK46_11030 (dnaE)
03440 Homologous recombination
LOK46_11030 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mens03032
]
LOK46_11030 (dnaE)
03400 DNA repair and recombination proteins [BR:
mens03400
]
LOK46_11030 (dnaE)
Enzymes [BR:
mens01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOK46_11030 (dnaE)
DNA replication proteins [BR:
mens03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOK46_11030 (dnaE)
DNA repair and recombination proteins [BR:
mens03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOK46_11030 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF1707
tRNA_anti-codon
BDHCT
Motif
Other DBs
NCBI-ProteinID:
WCS27322
LinkDB
All DBs
Position
complement(2325709..2329227)
Genome browser
AA seq
1172 aa
AA seq
DB search
MPRQLKEVGFVHLHVHSSYSLLEGALKVGSLIKAAVADRQPALALTDTNNLFGALEFSEK
AAGEGVQPIAGVQLSVAFEAADPHQRQAPTSHGIVLLAQDETGYANLLRLASRAYFDTAL
GEAPRLDAGALAGASEGLIALTGGMAGPLDAAFRAGRPELALNRLKRLKETFGEDRLYVE
IQRHGQSEEGRIETALLDLAGRHGLGIVATNEPYFAKPDDYDAHDALLAIAEGRLVSDER
RRRLTPSHAFKTRAEMAELFRDLPDALQATVEIAMRCAVRARTRKPILPNFGAVAAGETP
PMAEALAEASDAGARAVSADEPTELRRQAEAGLELRLKQHGTAPGFSEEDYRKRLEFELD
VIVKMKFPGYFLIVSDFIKWAKDHDIPVGPGRGSGAGSLVAWSLLITDLDPLRFGLLFER
FLNPERVSMPDFDIDFCVEGRERVIKYVQQRYGEGQVGQIITFGTLLARGVLRDVGRVLE
MPYGQVDKLTKLVPQNPANPVTLAQAIEGEPKLQQAMEEEPIVGRLIDISKKLEGLHRHA
STHAAGVVIGDRPLEELVPLYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTMLRCC
TDLLKQRDIHIDLASLPLDDPNTYGPMGRGETVGVFQVESAGMRKALCEMQADRLEDIIA
LVALYRPGPMANIPVYCERKLGRDAGNEASWYPDPKLEPMLKETFGIIVYQEQVMEIAKV
LAGYSLGEADMLRRAMGKKIRAEMDAQRDRFVKGCTERGLTKAKANEIFDLLAKFADYGF
NKSHAAAYALLTYQTAYLKANFPVEFLAAAMTLDIDNTDKLAEFRQDAQRLKIVVEPPSI
NTSGEVFEVRDGKIFYALAAIKGVGREAVRALVEARGDRPFKDLACLARRLNPRMINKRT
LESLVQAGALDCIEPDRARAFAAVEPMMKLAASAAEAETAGVTDMFGGVVADDVSLRIPP
HEIWPMADTLKREYAAIGFFISGHPLDEYGDLLDKLRVQSWTDFCRAVRAGTSSVGRVAA
SVLDRAERRTKTGNKMGIVTLSDRTAHFEAIIFSEGLGQYRDILEPGRPLVLQLQANLEG
EDVRARILTAEPLDQAVARHQKGIRIHLSDPRGVAPVQQRLSMRGESEVSLILKLDGGER
EVEIRLPGKFQASPALAGQLRTVPGVVQVEVS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagctcaaggaggtcggattcgtccacctccacgtccactcgtcctattcc
ctgctcgaaggggcgctgaaggtcggctccctgatcaaggcggcggtcgccgacaggcag
ccggccctggccctgaccgacaccaacaacctgttcggcgcgctggaattctccgagaag
gcggcaggggagggcgtccagccgatcgccggcgtgcagctctccgtggcgttcgaggcc
gcggacccgcaccagcgccaggcgccgaccagccacggcatcgtgctcctcgcccaggac
gagaccggctacgccaacctgctgcggctggcgagccgcgcctatttcgacacggccctc
ggcgaggcgccgcgcctcgatgccggagcgctcgcgggcgcctccgaggggctgatcgcg
ctcaccggcgggatggcgggccccctcgacgcggccttccgggcaggccggccggagctc
gccctcaaccgcctgaagcgcctgaaggagaccttcggcgaggaccggctctacgtcgag
atccagcgccacggccagtccgaggagggacggatcgagaccgcgctcctcgacctggct
ggccgccacggcctcgggatcgtggcgacgaacgagccctacttcgccaagcccgacgat
tacgacgcccacgacgcgctgctcgcgatcgcggagggccgcctcgtctcggacgagcgc
cgccgccgcctgacgccgagccacgccttcaagacccgggccgagatggccgagctgttc
cgcgacctgccggacgcgctccaggccacggtcgagatcgccatgcgctgcgccgtccgg
gcgcggacccgcaagccgatcctgccgaacttcggcgccgtggcggcgggcgagacgccc
cccatggcggaggccctggcggaggcgtccgacgcgggcgcgcgggcggtctcggccgac
gagccgaccgagctgcgccggcaggccgaggccgggctggagctgcgcctgaagcagcac
ggcacggcgccgggcttctccgaggaggattaccgcaagcgcctcgagttcgagctcgac
gtcatcgtcaagatgaagttcccgggctacttcctgatcgtctccgacttcatcaagtgg
gccaaggaccacgacatcccggtggggccgggccgcggctccggcgccggctcgctggtg
gcgtggtcgctgctcatcaccgacctcgacccgctccggttcggcctgctgttcgagcgc
ttcctcaaccccgagcgcgtctcgatgccggatttcgacatcgacttctgcgtcgagggc
cgcgagcgggtgatcaagtacgtgcagcagcgctacggcgaggggcaggtcggccagatc
atcaccttcggcacgctgctcgcccgcggcgtgctgcgcgacgtcggccgcgtcctcgag
atgccctacgggcaggtcgacaagctgaccaagctggtgccgcagaacccggccaacccg
gtgacgctcgcgcaggcgatcgagggcgagcctaagctccagcaggccatggaggaggag
ccgatcgtcggccgcctcatcgacatctccaagaagctggagggcctgcaccgccacgcc
tcgacccacgccgccggcgtcgtgatcggcgaccggcccctggaggagctggtgccgctc
taccgcgacccgaagaccggcatgcgggtcacccagttcaacatgaagtgggtcgagcag
gcggggctggtgaagttcgacttcctgggcctcaagaccctcaccatgctgcggtgctgc
accgacctgctgaagcagcgcgacatccacatcgacctcgcgtcgctgccgctcgacgat
ccgaacacctacgggcccatgggccggggcgagacggtcggcgtgttccaggtggaatcg
gccggcatgcgcaaggcgctctgcgagatgcaggccgaccggctggaggacatcatcgcc
ctggtggcgctctaccggccgggcccgatggccaacatcccggtctactgcgagcgcaag
ctcggtcgcgacgccggcaacgaggcgtcctggtacccggacccgaagctggagccgatg
ctgaaggagaccttcggcatcatcgtctaccaggaacaggtgatggagatcgccaaggtg
ctcgccggctactcgctcggcgaggccgacatgctccggcgcgccatgggcaagaagatc
cgcgccgagatggacgcgcagcgcgaccggttcgtcaaaggttgcaccgagcgcggcctg
accaaggccaaggcgaacgagatcttcgacctgctcgccaagttcgccgattacggcttc
aacaagagccacgcggcggcctacgcgctgctgacctaccagaccgcctacctgaaggcg
aacttcccggtcgagttcctggccgccgccatgaccctcgacatcgacaacaccgacaag
ctcgccgaattccgccaggacgcccagcgcctgaagatcgtcgtcgagccgccctcgatc
aacacttccggcgaggtgttcgaggtgcgcgacggcaagatcttctacgcgctggccgcc
atcaagggcgtcggccgcgaggcggtgcgggcgctggtggaggcgcgcggggaccggccg
ttcaaggacctcgcctgcctcgcccgccggctgaacccgcggatgatcaacaagcggacc
ctggagagcctcgtccaggccggggcgctcgactgcatcgagcccgaccgggcccgggcc
ttcgcggcggtggagccgatgatgaagctcgcggccagcgcggcggaggccgagaccgcc
ggcgtcaccgacatgttcggcggcgtggtggcggacgacgtgtccctgcgcatcccgccc
cacgagatctggccgatggccgacacgctcaagcgcgagtacgcggcgatcggcttcttc
atctcgggccacccgctcgacgagtacggcgacctgctcgacaagctgcgggtgcagagc
tggacggatttctgccgcgcggtccgggccgggacctcgagcgtcggccgggtggcggcc
tcggtgctcgaccgggcggagcggcggaccaagaccggcaacaagatgggcatcgtcacc
ctgtcggaccggaccgcgcatttcgaggcgatcatcttctccgaggggctcggccagtac
cgcgacatcctggaaccgggccgcccgctggttctgcagctccaggcgaacctggagggc
gaggacgtgcgcgcccgcatcctcaccgcggagcccctcgaccaggcggtcgcccgccac
cagaaaggcatccgcatccatctgagcgacccgcgcggcgtcgcccccgtgcagcagcgc
ctgtcgatgcggggcgagagcgaggtctcgctgatcctcaagctcgacggcggcgagcgc
gaggtggagatccggctgcccggcaagttccaggcgagcccggcgctcgccggccagctc
cggaccgtgccgggggtggtgcaggtggaggtgagctag
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integrated database retrieval system
