Methylobacterium sp. NMS14P: LOK46_11840
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Entry
LOK46_11840 CDS
T10783
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LOK46_11840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mens03021
]
LOK46_11840
03400 DNA repair and recombination proteins [BR:
mens03400
]
LOK46_11840
Enzymes [BR:
mens01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LOK46_11840
Transcription machinery [BR:
mens03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LOK46_11840
DNA repair and recombination proteins [BR:
mens03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LOK46_11840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WCS27478
LinkDB
All DBs
Position
complement(2503723..2504742)
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLQVTTGDDPKRVATVVAEPLERGFGTTLGNALRRVLLSSLQGAAV
TSVQIDGVLHEFSSIPGVREDVTDIVLNIKTIAIRSQTDAPKRMTLRKTGPGLVTAGDIG
TVGDIQILNPDLVICTLDDGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLFSPV
TKVSYRVETTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQVFVNFEDPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRK
SLNEIKEVLAGMGLHLGMDIPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattcagaagaattggcaggaactgatcaagccgaacaagctgcaggtcacgacc
ggcgacgaccccaagcgggtcgccacggtcgtcgccgagccgctcgagcgcggcttcggc
acgacgctgggcaacgccctgcgccgcgtgctcctgtcgtcgctccagggcgcggccgtg
acctcggtgcagatcgacggcgtgctgcacgagttctcgtcgatcccgggcgtgcgcgag
gacgtcaccgacatcgtcctgaacatcaagaccatcgcgatccgctcgcagacggacgcg
ccgaagcgcatgaccctgcgcaagaccggcccgggcctcgtcaccgcgggcgacatcggc
acggtcggcgacatccagatcctgaaccccgacctcgtgatctgcaccctcgacgacggc
gccgagatccgcatggagttcacggtcgcgaccggcaagggctacgtcccggccgagcgc
aaccgtcccgaggacgcgccgatcggcctgatcccggtcgactcgctgttctcgccggtc
accaaggtcagctaccgcgtcgagacgacccgcgagggccaggatctcgacaaggacaag
ttgaccatgacggtcgagaccaacggcgcggtctcgccggaggatgccctggcctacgcc
gcgcgcatcatccaggaccagctccaggtcttcgtgaacttcgaggatccgcgcaaggaa
gaggccgcgccgctcgcgccgcagctgcccttcaacccggcgctgctcaagaaggtcgac
gagctggagctgtcggtccgctcggcgaactgcctgaagaacgacaacatcgtctacatc
ggcgacctgatccagaagtccgagggcgagatgctgcggacgccgaacttcggtcgcaag
tcgctcaacgagatcaaggaagtgctcgccggcatgggcctgcacctcgggatggacatc
cccggctggccgccggagaacatcgaggatctcgccaagcgcttcgaggaacactactga
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