Methylobacterium sp. NMS14P: LOK46_22315
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Entry
LOK46_22315 CDS
T10783
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03030
DNA replication
mens03430
Mismatch repair
mens03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOK46_22315 (holA)
03430 Mismatch repair
LOK46_22315 (holA)
03440 Homologous recombination
LOK46_22315 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mens03032
]
LOK46_22315 (holA)
03400 DNA repair and recombination proteins [BR:
mens03400
]
LOK46_22315 (holA)
Enzymes [BR:
mens01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOK46_22315 (holA)
DNA replication proteins [BR:
mens03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOK46_22315 (holA)
DNA repair and recombination proteins [BR:
mens03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOK46_22315 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_assoc_2
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WCS23862
LinkDB
All DBs
Position
complement(4699101..4700138)
Genome browser
AA seq
345 aa
AA seq
DB search
MTAVKAGEIEGLIRRGPDPRIPVILVFGPDTGLVTERARKLAEDFVDDPADPFALVRIDG
DVLAADPGRLCDEAGTMGLFGGRRSIWVRPGTRNYAPAVEAVLGATVAEARIVVEAGDLA
KNNPLRTLCERSPKALAIPCYADDERTLSDLIERTLQERGLRIDRAAREVLARSLGGDRR
ASLMEIEKLALYAGGEGDRTVTLEHVEAVTSDVAASVLNTLIDAAFDGRRDAVERDYRRF
RHEGLDPGVVLGSALRHALTLLTTRLDNPEKTPAMMVATWRGLHFKRRASIEGQLGAWPP
GTLRQAVAALQEAVLACRRAEPDLAHALASAALLRVAEAGARRRR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcagtcaaggccggcgagatcgagggactgatccggcgcggccccgatccgcgc
atccccgtcatcctggtgttcgggccggataccggcctggtgaccgagcgggcccggaag
ctcgcggaggatttcgtcgacgacccggccgaccccttcgcgctggtgcggatcgacggc
gacgtcctggccgccgatccgggccggctgtgcgacgaggccgggacgatgggcctgttc
ggcggccgccggtcgatctgggtccggcccggcacccgcaactacgcgcccgccgtcgag
gcggtgctgggcgcgaccgtcgccgaggcccgcatcgtggtggaggccggcgacctcgcc
aagaacaacccgctccgcaccctctgcgagcgctcgccgaaggcgctcgcgatcccgtgc
tacgccgacgacgagcggaccctctcggacctgatcgagcgcaccctccaggagcgcggc
ctgcgcatcgaccgggccgcccgggaggtcctggcccgcagcctcggcggcgaccgccgc
gcgagcctgatggagatcgagaagctcgccctctacgcgggcggggagggggacaggacc
gtgaccctcgagcacgtggaggccgtcaccagcgacgtggcggcgagcgtgctcaacacc
ctgatcgacgccgccttcgacggtcgccgcgacgcggtggagcgcgactaccgccgcttc
cggcacgagggcctcgacccgggcgtggtgctgggctcggcgctgcggcacgccctgacg
ctgctcaccacccgcctcgacaatcccgagaagacccccgccatgatggtcgcgacgtgg
cggggcctgcatttcaagcgcagggccagcatcgagggccagctcggcgcgtggccgccc
ggcaccctccggcaggccgtggcggccctgcaggaggccgtcctcgcctgccggcgggcc
gagcccgacctggcccacgcgctggcctcggcggccctcctgcgggtcgcggaggcgggg
gcgcggcggcggcgctga
DBGET
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