Methylobacterium sp. NMS14P: LOK46_23030
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Entry
LOK46_23030 CDS
T10783
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOK46_23030 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mens03021
]
LOK46_23030 (rho)
03019 Messenger RNA biogenesis [BR:
mens03019
]
LOK46_23030 (rho)
Transcription machinery [BR:
mens03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LOK46_23030 (rho)
Messenger RNA biogenesis [BR:
mens03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LOK46_23030 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA_25
AAA
ATPase_2
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WCS28275
LinkDB
All DBs
Position
complement(4853462..4854748)
Genome browser
AA seq
428 aa
AA seq
DB search
MPAALEGVREVKLQDLKSKTPTDLTAFAEEVEVENASTMRKQELMFAILKQLAAKEVEII
GSGTVEVLQDGFGFLRSSDSNYLPGPDDIYISPTQIRRFGLRTGDTVEGPIRGPKDGERY
FALLKVNTINFENPEKIKHKVHFDNLTPLFPTKRFKLELDNPTKKDFSPRIIDIVAPIGK
GQRALIVAPPRTGKTVLMQNIAQSITLNHPECYLIVLLIDERPEEVTDMQRSVKGEVIAS
TFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVD
ANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVS
DKRIFPAIDITRSGTRKEELLVPPDSLKKTYVLRRILNPMGVTDAIEFLLDKLRQTKSNG
DFFDSMNT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgccctcgagggcgtccgcgaggtcaagctccaggacctcaagtcgaagacg
ccgaccgacctgacggccttcgccgaggaggtcgaagtcgagaacgcctcgaccatgcgc
aagcaggagctgatgttcgccatcctgaagcagctcgctgccaaggaggtcgagatcatc
ggctcgggcaccgtcgaggtgctgcaggacggcttcggcttcctgcgctcctccgactcg
aactacctgcccggcccggacgacatctacatctcgccgacccagatccgccgcttcggc
ctacggaccggcgacaccgtcgagggcccgatccgcggccccaaggacggcgagcgctac
ttcgcgctcctcaaggtcaacacgatcaacttcgagaaccccgaaaagatcaagcacaag
gtccacttcgacaacctgacgccgctcttcccgacgaagcggttcaagctcgagctggac
aacccgaccaagaaggatttctcgccgcggatcatcgacatcgtggcgccgatcggcaag
ggccagcgcgccctgatcgtggcgccgccgcgcacgggtaagaccgtgctgatgcagaac
atcgcgcagtcgatcaccctgaaccaccccgagtgctacctgatcgtgctgctcatcgac
gagcggcccgaggaggtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcctcg
accttcgacgagccggccacccgccacgtgcaggtcgccgagatggtgatcgagaaggcc
aagcgcctcgtggagcacgggcgcgacgtcgtcatcctgctcgactcgatcacccgcctc
ggccgcgcctacaacacggtggtgccgtcctccggcaaggtgctgaccggcggtgtcgac
gccaacgccctgcagcggcccaagcgcttcttcggtgccgcccgcaacatcgaggagggc
ggctcgctctcgatcatcgccaccgcgctcatcgacaccggctcgcgcatggacgaggtg
atcttcgaggagttcaagggcaccggcaactccgagatcatcctggaccgcaaggtctcc
gacaagcgcatcttcccggcgatcgacatcacccgctcgggcacccgcaaggaggagctg
ctggtcccgccggactcgctcaagaagacctacgtgctgcgccgcatcctcaacccgatg
ggcgtcaccgacgcgatcgagttcctgctcgacaagctgcgccagaccaagagcaacggc
gacttcttcgactcgatgaacacctga
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