Methylobacterium sp. NMS14P: LOK46_27925
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Entry
LOK46_27925 CDS
T10783
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mens Methylobacterium sp. NMS14P
Pathway
mens00300
Lysine biosynthesis
mens00470
D-Amino acid metabolism
mens01100
Metabolic pathways
mens01110
Biosynthesis of secondary metabolites
mens01120
Microbial metabolism in diverse environments
mens01230
Biosynthesis of amino acids
Module
mens_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mens00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOK46_27925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LOK46_27925 (dapF)
Enzymes [BR:
mens01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LOK46_27925 (dapF)
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Motif
Pfam:
DAP_epimerase
Pro_racemase
Clostridium_P47
DUF6140
Motif
Other DBs
NCBI-ProteinID:
WCS24907
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Position
5880679..5881566
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AA seq
295 aa
AA seq
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MSALAHRRFLKMHGAGNAIVVLDLRGSAARVRPEEARAIARDPGSTFDQLMVLHDPVSPG
TDAFMRIYNTDGSESGACGNGTRCVAYAMLDDPAMARPAEGGRLTLETQAGLLGVRRVSE
RAFTVDMGRPRLAWDEIPLSEPFPDTRRIELQIGPIDDPILHSPGAVNMGNPHAVFFVEQ
DPDSFDLARIGPMLENHPLFPERANISVAQVTGRETIKLRVWERGAGLTLACGTAACATV
VAASRLRMIGRQASVALPGGELFVEWRADDHVLMTGPVALVAEGTLAPELFDSAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactcgcccacagacgcttcctgaagatgcacggcgccggcaacgcgatcgtg
gtgctggacctgcgcggctccgccgcgagagtgcggcccgaggaggcgcgggcgatcgcg
cgggatcccggctcgaccttcgatcagctgatggtcctgcacgatcccgtgagcccgggc
acggacgcgttcatgcgcatctacaacaccgacggctcggaatcgggcgcctgcggcaac
ggcacgcgctgcgtcgcctacgcgatgctcgacgacccggccatggcccggccggccgag
ggcggccggctcaccctcgagacccaggcgggcctgctcggcgtgcgccgcgtctcggag
cgggccttcacggtcgatatgggccggccgcggctcgcctgggacgagattcccctgtcc
gagccgttccccgacacgcggcggatcgagctgcagatcggcccgatcgacgatccgatc
ctgcactcgccgggcgccgtgaacatgggcaacccgcacgcggtgttcttcgtggagcag
gatccggacagcttcgacctcgcccggatcggcccgatgctggagaaccacccgctgttc
ccggagcgcgccaacatctcggtggcgcaggtgacgggccgcgagacgatcaagctccgc
gtctgggagcggggggccgggctgacgctcgcctgcggcaccgccgcctgcgccaccgtg
gtggccgcctcgcgcctgcggatgatcggccggcaggccagcgtcgcgctgccgggcggc
gagctgttcgtcgagtggcgcgccgacgaccacgtcctgatgaccggcccggtcgcgctc
gtcgccgagggcaccctggcgccggagctgttcgacagcgcggcctga
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