Massilia endophytica: LSQ66_00400
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Entry
LSQ66_00400 CDS
T09693
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_00400
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UGQ46976
LinkDB
All DBs
Position
complement(78988..81804)
Genome browser
AA seq
938 aa
AA seq
DB search
MKLKLKPLAAAAAAMSMMYTLAPATAAAQSKADDASATADQTVTITGIRASIAKSMAVKR
NADTNVEVVSAEDVGKMPDKNIADALSRLPGVNVQYGGALAMDEAERVAVRGTSPNLNLV
TVNGHSLSAGDWHLGDQASSGRSVGFGLMPSQLIGQSIVYKTGRADVTEGGVSGSVDIIT
RKPLDFKNSLNGEVALGVAHATLAKKTDPQASGLLAWKNEAKNFGVLLQLFKEDRHLRRD
GQEIFAYDVLTQAQATAAGQPSLAGKRMASSLNAAMFEGKRQRQGGYVGLQYKDRDIEVN
ASGFHAELKADNYNSSAYALPSQLVRNGYQIQNPVVDGAVITSATLVRPAGSTAQVVGLQ
FDHFYRMGAKSTSDFLDLDGKWRVNQDFTLHARAGSTEGKGLTPSEPSLVYGLISPSSVK
YSQAANQPAQYSVLNASGQQIDLANASNYALMSNLAPAVESIDKERYFHLDGQYSLDSDL
IKTIKFGGRGTKHERQFDRWEGRYNVQDNASGPITPSPFTPVSGGLLVTQVAPPSPATRY
PGNWANGVDGNFPRDYFRFDMNQMREFADKNVNWDRTLNHNYTSGYSIEEDIRALYGMAE
FELNPQFSGNFGVRWVETKLQSTSYQQIPAATCAPMRNCAVPGAIVGSRLGSYVAQTVET
TTKDLLPSLNVRWDLNNDLIARAALTRTLGRPNYNELAGAVILDDLRATGSSGNPGLKPI
TSNNADATLAWYFAPRAMVSGGVFSQHLHDYVKTGTSVVDYFNISQGKITPYTVTSRKGV
KATLRGFEAALELPIAAGFGFGANGTYVKSKDVDGVELLGTSKRTYNLRGFYEDDKISAS
LAWNYRSDYAIGFIGDGTNNVLRDAAGNITQYNGQHRYAGEGSLSLSLGYKFTPSISIHF
DANNLNDPVRHTYYITENAPGYWHQNGRQYFLNLRMKY
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaagctgaagcccttggccgccgcggcggccgccatgtcgatgatgtacacc
cttgcgccggccaccgcggccgcccagagcaaggctgacgacgcctccgccactgccgac
cagaccgtgaccattaccggcatccgcgcctcgatcgccaagtccatggccgtcaagcgc
aatgcggataccaacgtcgaagttgtgtccgccgaagacgtgggcaagatgcccgacaag
aacatcgccgacgccctttcccgcctgccgggcgtgaacgtgcagtacggcggcgccctg
gcgatggacgaagccgagcgcgtggccgtgcgcggcaccagccccaacctgaacctggtc
accgtcaacggccactcgctgagcgcgggcgactggcacctgggcgaccaggccagcagc
ggccgcagcgtaggcttcggcctcatgccttcacagctgatcggccagagcatcgtctac
aagaccggccgcgccgacgtgaccgaaggcggtgtgtccggcagcgtggacatcatcacc
cgcaagccgctggacttcaagaattcgctgaacggcgaagtggccctgggcgtggcgcat
gccaccctggcgaagaaaaccgacccgcaggcgagcggcctgctggcctggaagaacgaa
gcgaagaatttcggcgtgctgctgcagctcttcaaggaagaccgccacctgcgccgcgac
ggccaagagatcttcgcctatgacgtgctgacccaggcgcaggccacggctgcaggccag
cccagcctggcgggcaagcgcatggcgagcagcctgaacgcggcaatgttcgaaggcaaa
cgccagcgccagggcggctacgtcggcctgcagtacaaggaccgcgatatcgaagtgaac
gccagcggcttccacgccgagctgaaggcggacaactacaacagctcggcctacgccctg
ccctcgcagctggtgcgcaacggctaccagatccagaatccggtcgtcgatggcgccgtc
atcaccagcgcaacgctggtgcgcccggcgggcagcacggcccaggtggttggcctgcag
ttcgaccacttctaccgtatgggcgccaagtccaccagcgacttcctcgacctggacggc
aagtggcgcgtgaaccaggacttcaccctccacgcgcgcgcgggctccaccgaaggcaag
ggcctgacgccgtcggaaccgagcctggtgtacggcctgatcagcccctcttccgtcaag
tattcgcaggcagccaaccagcctgcccagtactccgtgctgaacgcttcgggccagcag
atcgacctggccaacgcttcgaactacgcgctgatgagcaacctcgccccggccgtggag
tccatcgacaaggagcgctacttccacctggacggccagtactcgctggacagcgacctg
atcaagaccatcaagttcggtggacgcggcaccaagcatgagcgccagttcgaccgctgg
gaaggccgctacaacgtgcaggacaatgccagcggcccgatcaccccgtcgccattcacg
ccggtttcgggcggcctgctggtgacccaggtggcgcccccctcgcccgccacgcgctat
cccggcaactgggccaacggcgtcgacggcaacttcccgcgcgactacttccgcttcgac
atgaaccagatgcgcgagttcgcggacaagaacgtgaactgggatcgcacgctcaaccac
aactacacgagcggctacagcatcgaggaagacatccgcgccctgtacggcatggccgag
ttcgaactcaaccctcagttcagcggcaacttcggcgtgcgctgggtcgagaccaagctg
cagtccacctcctaccagcagattcctgccgcaacctgcgcaccgatgcgcaattgcgcg
gtgccgggcgccatcgtcggttcgcgcctgggcagctatgtcgcccagaccgtggaaacc
acgaccaaggacctgctgccaagcctgaacgtgcgctgggatctgaacaacgacctgatc
gcacgcgccgcgctgacccgcacgctgggccgtccgaactacaacgagctggccggcgcc
gtgatcctggacgacctgcgcgccaccggttcgagcggcaatccgggcctgaagccgatc
acctcgaacaatgccgatgcaacgctggcgtggtacttcgctccgcgcgccatggtgagc
ggcggcgtgttcagccagcacctgcacgactatgtgaagaccggcacctcggtggtggac
tacttcaacatcagccagggcaagatcacgccttacaccgtgacctcgcgcaagggcgtg
aaggcgacgctgcgcggcttcgaagcggcgctggaacttccgattgcagccggtttcggc
ttcggcgcgaacggcacctatgtgaagtccaaggatgtggatggcgtggagctgctgggc
acgtcgaagcggacctacaacctgcgcggcttctacgaggatgacaagatcagcgcgagc
ctggcctggaactatcgcagcgactacgcgatcggcttcatcggcgacggcaccaacaac
gtgctgcgcgacgctgcgggcaatatcacgcagtacaacggccagcaccgctatgcgggc
gaaggcagcctgtcgctgtccctgggttacaagttcacgccgtcgatcagcatccacttc
gacgccaacaacctgaacgacccggtccgccacacctactacatcacggagaacgcgccc
ggctactggcaccagaacggccgccagtatttcctgaacctgcgcatgaagtactga
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