Massilia endophytica: LSQ66_00630
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Entry
LSQ66_00630 CDS
T09693
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
meny
Massilia endophytica
Pathway
meny00550
Peptidoglycan biosynthesis
meny01100
Metabolic pathways
meny01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LSQ66_00630 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LSQ66_00630 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
meny01011
]
LSQ66_00630 (mrdA)
Enzymes [BR:
meny01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LSQ66_00630 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
meny01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LSQ66_00630 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
MRFAP1
Motif
Other DBs
NCBI-ProteinID:
UGQ47014
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All DBs
Position
129556..131691
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AA seq
711 aa
AA seq
DB search
MTELKNNERELHLFRLRLTVLGALVFICFALLLARFVWLQIVKHSDYAAQAEDNRIAVVP
VQPNRGLILDRNGVVLARNYSAYTLEITPSKLRVPLEEAIDQLATLVEVTPKDRRRFKKL
LEESKNFASVPLRTRLSDEEVARFTANRFRFPGVEVQARLFRQYPLGETASHVIGYIGRI
NQSEAKTLEASEDAANYNGTDYIGKEGLEKSYERQLHGITGYEEVEVSAGGRAIRTLSRT
PATPGSNLILSIDIELQKIAEEAFGEWRGALVAIEPETGDVLAYVSRPGYDPNLFVDGID
SQSWNELNTSLDKPMVNRPLSGTYAPGSTFKPFMALAALELGKRTPSQAIADPGYMYLGS
HKFRDDVVGGHGMVDMRKSIVVSCNTYYYQLGRDMGIDSIHDFMKPFGFGQKTGIDLENE
KTGVLPSQEWKRNRYKKNPQAGKWVGGDTISVSNGSGYNSYTPLQIAHAMANLANNGIVM
KPHLVKIIEDGGTRARKLTVPKESYRIPLKQENIDFIKNAMVGVTSEPGGTAFRAFQNTG
YTVGGKTGTAQVVGIKANEKYNASTLAERLRDNSLFSAFAPADKPRIVLAMVVENAGFGA
AVAAPIARKVLDYWILGKRPTEKETTKVPKEDADMLVPLEELSPEDVAAVERERAAAEHA
QEDSHDESPGLMPTLPARQKPVAKPAPAPHLAPPSAPPPPTNAVPAAAQKR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactgaagaacaacgaacgggaactgcatctgttccgcctgcgcctgaccgtg
ctcggcgcgctggtgttcatctgcttcgccctgctgctggcgcgctttgtgtggctgcag
atcgtcaagcacagcgactatgccgcccaggccgaggacaaccgcatcgccgtggtgccg
gtgcagcccaaccggggcctgatcctggaccgcaacggcgtggtcctggcccgcaactat
tccgcttacacgctggagatcacgccgagcaagctgcgcgtgccgctggaggaggccatc
gaccagttggcaaccctggtcgaagtcacgcccaaggaccgccgccgtttcaagaagctg
ctggaagaatccaagaacttcgccagcgttccgctgcgcacccgcctgagcgacgaggaa
gtggcgcgcttcacggccaaccgcttccgcttccccggcgtggaggtgcaggcgcgcctg
ttccgccagtatccgctgggcgaaacggcctcgcacgtgatcggctatatcggccgcatc
aaccagagcgaagcgaagaccctggaagcgagcgaagatgcagccaactacaacggcacc
gactacatcggcaaggagggcctggagaagagctacgagcgccagctgcacggcatcacg
ggctacgaggaggtggaagtgtcggcaggcgggcgcgccatccgcaccctgtcgcgcact
cccgccacgccgggcagcaacctcattctctccatcgacatcgagctgcagaagatcgcc
gaggaagccttcggcgaatggcgcggcgcgctggtggccatcgaacccgagaccggcgat
gtgctggcctacgtctcccgccccggctacgaccccaacctctttgtggacggcatcgac
tcccagagctggaacgaactcaatacctcgctcgacaagcccatggtgaaccgcccgctg
tccggcacctacgcaccggggtccaccttcaagcccttcatggcgctggccgcgctggaa
ctgggcaagcgcacgccgagccaggccatcgccgatccgggctatatgtacctgggcagc
cacaagttccgcgacgacgtggtgggcggccacggcatggtggacatgcgcaaatccatc
gtcgtgtcctgcaatacctactactaccagctgggccgcgacatggggatcgattcgatc
cacgacttcatgaagcctttcggcttcggccagaagacaggcatcgacctggaaaacgag
aagaccggcgtgctgccttcccaggaatggaagcgcaaccgctacaagaagaatccgcag
gcgggcaaatgggtgggcggcgacaccatctccgtcagcaacggctccggctacaacagc
tatacgcccttgcagattgcgcacgccatggccaacctggccaacaacggcattgtgatg
aagccccacctggtgaagatcatcgaggacggcggaacgcgcgcgcgcaagctcacggtg
ccgaaggagagctaccgcatcccgctgaagcaggagaacatcgacttcatcaagaacgcc
atggtgggcgtaacgagcgaaccgggaggcacggccttccgcgccttccagaacaccggc
tacaccgtgggcggcaagacgggtacggcgcaggtggtcggcatcaaggccaacgaaaaa
tacaatgcctcgacgctggccgaacgcctgcgcgacaattcgctgttctcggccttcgct
ccagcggacaagccgcgcatcgtattggcgatggtggtggagaacgccggtttcggcgcc
gctgtggcggccccgatcgcccgcaaggttctcgactactggattctcggcaaacgcccg
acggaaaaggaaaccaccaaggtgccgaaggaagacgcggacatgctcgtgccgctcgaa
gagctgagccccgaagacgttgccgccgtggaacgcgagcgcgccgccgccgagcacgcg
caggaggacagccatgacgaatccccgggcctgatgcctacgctcccggcgcggcagaag
cctgtcgccaagcctgcgcctgcgccgcacctggcgccgccctccgcgccgccgccgcca
accaatgccgtgccggcggcagcacagaagaggtag
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