Massilia endophytica: LSQ66_02295
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Entry
LSQ66_02295 CDS
T09693
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meny03032
]
LSQ66_02295
03036 Chromosome and associated proteins [BR:
meny03036
]
LSQ66_02295
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_02295
DNA replication proteins [BR:
meny03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LSQ66_02295
Chromosome and associated proteins [BR:
meny03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LSQ66_02295
DNA repair and recombination proteins [BR:
meny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LSQ66_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2530
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UGQ47331
LinkDB
All DBs
Position
complement(480125..480412)
Genome browser
AA seq
95 aa
AA seq
DB search
MKKGELIAEFAKRTEMSGAAANDAVNTLIAIVTERLKKGDTVGITGFGTFSVAKRAARKG
RNPATGEAIKIAASKTPKFSAGATLKAAVNPTKKK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgaactgattgcagaatttgcgaagcgtaccgagatgtccggcgcagcc
gccaacgatgcagtgaacactctgattgccatcgttaccgagcgtctgaaaaagggcgac
acggtcggcatcaccggcttcggcaccttctccgtcgccaagcgcgcagcacgcaaaggc
cgcaatcctgccaccggcgaagcgatcaagatcgcagcgtcgaaaaccccgaaattctcg
gctggcgctaccctgaaagcggcagtgaacccgaccaagaagaagtaa
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