Massilia endophytica: LSQ66_02520
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Entry
LSQ66_02520 CDS
T09693
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
meny
Massilia endophytica
Pathway
meny02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LSQ66_02520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_02520
Transporters [BR:
meny02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LSQ66_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_22
AAA_21
TniB
AAA_16
AAA_29
nSTAND1
ATPase
AAA_10
ABC_ATPase
PRK
RecA
DLIC
Motif
Other DBs
NCBI-ProteinID:
UGQ47375
LinkDB
All DBs
Position
549333..551015
Genome browser
AA seq
560 aa
AA seq
DB search
MDNLLDVRNLRIAFRIDKKNTFEAVKGISFSVPRNSTVALVGESGSGKSVSSLAVMGLLP
EHTTIIDPASSVLFDGREVLHLSMRERRAMCGKDISMIFQEPMSSLNPVFTVGYQIGEVL
RQHMGMTGKQARARTLALLEEVGIPDPAAKIDAYPSQMSGGQQQRVMIAMAIACEPKLLI
ADEPTTALDVTIQKQIMELIASLQKKHQMSVLFITHDLGLVGEIADSVIVMRHGEVRETG
ATQQIFGDPQDSYTRALLHCRPSLDARPIRLPVIADYMDGKAGPGVDMPQRERGFRPDDD
IVLDVQDLQKSFWLREGLFGKREFKAVKGVSFKLPRGKTLGVVGESGSGKTTVGLTLLRL
HKATGGRAIFEGKDLISMPESEYMAYKRRIQIIFQNPYASLNPRFTVGQILLEPMRLHRI
GGNDSERTEMALQLLQRVGLPAHAYHRYPHEFSGGQRQRIAIARCLTMKPEILVCDESVS
ALDVSVQAQVLNLLQDLQDEYGLSYIFISHDLSVVKYISDQVMVMNKGEVVELANSDELY
RNPVHPYTRTLLGAIPRGLA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctgctcgacgtacgcaatctgcgcatcgctttccgcatcgacaagaagaat
accttcgaggccgtgaagggcatctccttcagtgtgccgcgcaacagcacggtggccctg
gtgggcgaatcgggcagcggcaagtccgtgagctccctggccgtgatgggccttctgccg
gagcacaccaccatcatcgaccccgccagcagcgtgctgttcgacgggcgcgaagtgctg
cacctctccatgcgcgagcggcgcgccatgtgcggcaaggacatctccatgattttccag
gagcccatgtcctcgctcaatcccgtgttcacggtgggctaccagatcggcgaggtgctg
cgccagcatatgggcatgaccggcaagcaggcgagggcgcgcacgctggcgctgctggaa
gaagtgggcattcccgaccctgcggccaagatcgacgcctacccgagccagatgtccggc
gggcagcagcagcgcgtcatgatcgccatggccatcgcctgcgaaccgaagctgctgatc
gcggacgaaccgaccaccgcgctcgacgtcaccatccagaagcagatcatggagttgatc
gcgagcctgcagaagaagcaccagatgtccgtgctcttcatcacgcacgacctcgggctg
gtgggcgagatagcggacagcgtgatcgtgatgcggcatggcgaagtgcgcgaaaccggc
gccacacagcagattttcggcgacccgcaggacagctacacgcgcgcgctgctgcattgc
cgcccctcgctggacgcgcgtcccatccggctgcccgtgatcgccgactacatggacggc
aaggctggtcccggcgtggacatgccgcagcgcgagcgcggcttcaggccggacgacgac
atcgtcctcgacgtgcaggacctgcagaaaagcttctggctgcgcgaaggcctgttcggc
aagcgcgaattcaaggcagtgaagggcgtatccttcaagctcccgcgcgggaagacgctc
ggcgtggtgggcgaatccggctccggcaagaccacggtgggcctgaccctgctgcgcctt
cacaaggccacgggcgggcgcgccatcttcgaaggcaaggacctcatctccatgcccgag
agcgaatacatggcctacaagcggcgcatccagatcatcttccagaacccgtacgcctcg
ctcaacccgcgcttcacggtcggccagatcctgcttgaacccatgcgcctgcaccgcatc
ggcggcaacgacagcgagcgcacggagatggcgctgcagctgctgcaaagggtggggctg
cccgcacacgcctaccaccgctacccgcatgaattctcgggcgggcagcggcagcgcatt
gccattgcgcgctgcctgaccatgaagccggagattctggtgtgcgacgaatcggtatcg
gcgctggacgtatcggtgcaggcccaggtgctgaacctgctgcaggatctgcaggacgaa
tacggcctgtcctacatcttcatttcgcacgacctctcggtggtgaaatacatctccgac
caggtcatggtgatgaacaagggcgaggtggtggagctcgccaactccgacgagctgtac
cgtaaccccgtccacccttatacgcggactctgctgggcgccatcccgcgcggacttgca
tag
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