Massilia endophytica: LSQ66_03035
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Entry
LSQ66_03035 CDS
T09693
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
meny
Massilia endophytica
Pathway
meny00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LSQ66_03035 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
meny01007
]
LSQ66_03035 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meny03016
]
LSQ66_03035 (alaS)
Enzymes [BR:
meny01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
LSQ66_03035 (alaS)
Amino acid related enzymes [BR:
meny01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LSQ66_03035 (alaS)
Transfer RNA biogenesis [BR:
meny03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LSQ66_03035 (alaS)
Prokaryotic type
LSQ66_03035 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Prefoldin_2
WXG100
ATG14
CCDC144C
DUF7491
DUF1664
ADIP
HlyD_2
Laminin_II
Leu_zip
Bacillus_HBL
DUF4140
CALCOCO1
ANC1_spectrin
FlxA
CdvA
Motif
Other DBs
NCBI-ProteinID:
UGQ47471
LinkDB
All DBs
Position
652547..655156
Genome browser
AA seq
869 aa
AA seq
DB search
MKSSEIREKFLKFFESKGHTIVRSSPLVPGNDPTMLLTNSGMVQFKDVFLGLDTRPYSRA
TSVQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIQYAWELLTKVYMLP
AEKLTVTVYQEDDEAYDIWANEIGVPKERIIRIGDNKGSRYASDNFWQMADTGPCGPCTE
IFYDHGPDIWGGPPGSPEEDGDRFIEIWNLVFMQFNRDEAGNMSKLPKPCVDTGMGMERL
AAVLQHVHSNYEIDLFQNLIKAAARETGATDLENKSLRVIADHIRAASFLIVDGIIPSSE
GHGYVLRRIIRRALRHGHKLGQAKPFFYKLAVDLDKEMGSAYPELSEKLAYVQQVLKTEE
ERFGETLENGMKILEAQLAKDAKNLDGATAFTLYDTYGFPLDLTADICRERGVTLDEAGF
HEAMENQKKTARAAGKFKMAANVEYSGAKTNFVGYERLSFDSTVIALYSNGAPVQELKAG
ENGIVVLDTTPFYAESGGQVGDQGVIQSASARFNVEDTLKIQADVFGQHGVLAQGTLKVG
DKVSAQVDTEKRGRTIRNHSATHLMHKALREVLGPHVAQKGSLVDPDKTRFDFSHNAPLT
AEQIAQIETIVNKEILENHATKAQHMSFDDAVKHGAMALFGEKYGDEVRVLDIGSSKELC
GGVHVNRTGDIGLFKIVSEGGVAAGIRRVEAVTGEGALALVQGMTRRLNEAAAALKATPE
EITSRISQVQDQVKSLEKELNALKSKLASGQGDELATKAVDVKGIKVLAATMEGADVAAL
RETMDKLKDKLKTAAIVLASVADGKVSLIAGVTQDSIGKVKAGELVNFVAQQVGGKGGGR
PDMAQAGGTNPAALPGALEGVAAWVESRL
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatccgaaatccgcgagaagttcctgaagttcttcgaatccaagggtcacacc
atcgtccgttccagccctctggtgccaggcaatgacccgaccatgctgctcacgaactcc
ggcatggtgcagttcaaggacgtgttcctcggcctggatacccgtccctattcgcgcgcg
acctccgtgcagcgctgcgtgcgcgccggcggcaagcacaatgacctggaaaacgtgggc
tacaccgcgcgccaccacaccttcttcgaaatgctgggtaacttcagcttcggcgactac
ttcaagcgcgacgccatccagtacgcctgggagctgctgaccaaggtgtacatgctgccc
gccgagaagctgaccgtcaccgtctaccaggaagacgacgaggcctacgatatctgggcc
aacgaaatcggcgtgccgaaagagcgcatcatccgcatcggcgacaacaagggctcgcgc
tacgcgtcggacaacttctggcagatggccgataccggcccatgcggcccctgcaccgag
atcttctacgaccacggcccggacatctggggcggccctcccggctcgcctgaagaagac
ggcgaccgcttcatcgaaatctggaacctggtgttcatgcagttcaaccgcgacgaagcg
ggcaacatgagcaagctgccgaagccctgcgtggatacgggcatgggcatggagcgcctg
gccgccgtgctgcagcacgtgcacagcaactacgagatcgacctgttccagaacctgatc
aaggccgccgcccgcgaaaccggcgccaccgacctggaaaacaagtcgctgcgcgtgatc
gccgaccatatccgcgccgcttccttcctgatcgtggacggcatcatcccttcgtccgaa
ggccacggctacgtcctgcgccgcatcatccgccgcgcactgcgccatggccacaagctg
ggccaggccaagcctttcttctacaagctggcggtagacctggacaaggaaatgggttcg
gcctatccggagctgagcgagaagctggcttacgtgcagcaggtgctgaagaccgaagaa
gagcgcttcggcgaaacgctggaaaacggcatgaagatcctggaagcgcagctggccaag
gacgcgaagaacctggacggcgccaccgccttcaccctgtacgacacctacggcttcccg
ctggacctcaccgccgacatctgccgcgagcgcggcgtgacgctggatgaagcaggcttc
cacgaagccatggagaaccagaagaagaccgcccgcgctgcaggcaagttcaagatggcc
gccaacgtggaatacagcggcgccaagaccaatttcgtgggctacgagcggctgtccttc
gactccaccgtgatcgccctgtacagcaacggcgcgccggtgcaggagctgaaggctggc
gagaacggcatcgtggttctggacaccacccccttctacgccgagtccggcggccaggtg
ggcgaccagggtgtgatccagagcgcctcggccaggttcaacgtggaagacacgctgaag
atccaggccgacgtgttcggccagcacggcgtgctggcgcagggaacgctgaaggtgggc
gacaaggtgtccgcccaggtggataccgagaagcgcggccgcaccatccgcaaccactcc
gcaacgcacctgatgcacaaggcgctgcgcgaggtgctgggcccacacgtggcgcagaaa
ggctcgctggtcgatccggacaagacccgcttcgacttcagccacaacgcgccgctgacg
gccgaacagatcgcgcagatcgaaaccatcgtcaacaaggaaatcctggagaaccacgcg
acgaaggcgcagcacatgtccttcgacgacgcggtgaagcacggcgccatggccctcttc
ggcgagaagtacggcgatgaagtgcgcgtgctggacatcggctcctccaaggaactgtgc
ggcggcgtgcacgtgaaccgcacgggcgacatcggcctgttcaagatcgtgtccgaaggc
ggcgtggcggccggtatccgccgcgtggaagccgtgacgggcgagggcgcgctggcgctg
gtgcagggcatgacccgccgcctgaacgaagcggctgccgcgctgaaggccacgccggaa
gagatcacctcccgcatttcgcaggtgcaggaccaggtgaagtcgctggagaaggagctg
aacgcgctcaagtccaagctggcttccggccagggagacgagctggccaccaaggccgtg
gacgtcaagggcatcaaggtgctggccgcgaccatggaaggcgcggacgtggccgccctg
cgcgaaaccatggacaagctgaaggacaagctgaagaccgccgccatcgtgctggccagc
gttgccgacggcaaggtgagcctgatcgcgggcgtgacccaggactccatcggcaaggtc
aaggcgggggagctggtgaacttcgtcgcacaacaagtgggcggcaaaggcggcggacgc
cccgatatggcgcaggccggcggcaccaacccggctgcactgccgggcgccctggagggc
gttgcagcatgggtggaatccaggctgtaa
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