Massilia endophytica: LSQ66_03085
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Entry
LSQ66_03085 CDS
T09693
Name
(GenBank) PKD domain-containing protein
Organism
meny
Massilia endophytica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
Glyco_hydro_18
PKD
K319L-like_PKD
Sde0182_C
Big_9
InlK_D3
He_PIG
Bact_surface_Ig-like
PLipase_C_C
Motif
Other DBs
NCBI-ProteinID:
UGQ47481
LinkDB
All DBs
Position
664239..667937
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AA seq
1232 aa
AA seq
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MKTKLIARALLLALSSTACLLPAAGHAANAKPVPVVHWEQFPGEPIIVFGGADSTDPDGH
VVGYSWKFGDGASGTGQDTSHMYAKPGKYTVTFTAKDDKGATASKSFTVTVAGKPNVAPT
AKGTVTVTPNSFTAAFNATGSSDPDGRIASYAWNFGDGTSGTGLKASHVYKTAGSYTAVL
TVKDNEGATNTLELPLAVTGPAPNKPPVAAATATQQAGKLTVSFNATASSDPDGKVASYA
WNFGNGKTGAGATPSHTYAAAGSYNVTLTVKDNKGATGSLSLPVTVNPPAANKPPVAAAS
ANQSGKLTVSFDASASKDTDGSIASYAWNFGDGKTGAGMKVSHVYAAAGQYQATLTVKDN
KGASASLPLTVTVTAGSTAATPWVSGYYAGWFWNDYQPQHIDMSAMTHVVFGRVAPGGGT
LGGTPGQIVPGAGTAHDAGQLPASVTSLSVEDFLVQRAHGAGIKALLMLGGNDDGAGFSA
STKPGVRTTFINNLVTYLATHDYDGVDVDWEDHIETADDQNQLIAFITELKQAASIHNRY
RDRPLIVTFPTSILNMNYDVVPGWKVQVAELVDQFNIMSYEIAFAHGGWTTWHFSPLFGQ
SGTHPSDVSSSVQAYIDAGIVPGKIGIGLGFYALSFTPPVTGPNQTVSQMESNDATWSYA
NLVNGGFLSAGTYVWDDVAQVGYRSYPGGFTGHAEYNTGTTGFLSYEDPRSIAVKGKWVR
EKQLGGAIIWTINYGSPDGLNNPLLNAVKQSFLMGADSVQPYARFTSAMPSTTELRFNFD
ASQSADAEDKPVASYSWNFGDGATATGVNASHVYASAGRYLVTLTVTDAKGVSASTTSSV
LADFPPPPDELPPLEPVPAANGPRPWVTAYYAGWFWNLFEPQYVDMSAMSHYVFGRVAPG
GGTLGGQPGEVVPGAGTAHQPGILGSLTNKSVEDYLVQRAHESGVKALLMIGGMGDGLGF
LRSTTSLTRPVFVKNLLDYLEAHDYDGIDLDWEDVLDTDQAKLQLTALIANLRAGAKERA
RWQDPSKPFVITFPNYAMNMNYETVPQWKVTVASIVDQFNLMSYALGFNADGWTSTTFSP
IEGKTPTHPMDVSSSIQAYQDAGIDRKKLGVGIGFYGMSYAPPVTAPNQPATAMNNSDTS
LSYAQLVNEGYLSNGSYHWDDVAKMGYRSYSGANGFKGAGMLSYEDEASIAAKGKWVRNT
GTGGAIIWTINYGSPDGKANPLMNAAKKAFLQ
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaagctcatcgcgcgtgcgctattgctcgcgctaagtagcacagcctgtcta
ttgcccgctgccgggcacgccgccaacgccaagccggtcccggtcgtgcactgggaacag
ttcccgggtgaaccgatcatcgtattcggcggcgccgattccaccgatccggacggccat
gtcgtcggctacagctggaaattcggcgacggcgcgagcggtacaggccaggacaccagc
catatgtacgccaagcccggcaagtacacggtgactttcacggccaaggacgacaagggc
gccaccgccagcaagagctttaccgtgacggtggcgggcaagcccaacgtggctcccaca
gccaagggcaccgtgaccgtaacgccgaacagcttcacggccgccttcaacgccaccggt
tcgagcgatccggatggcaggatcgccagctatgcctggaacttcggcgacggcaccagc
ggtacgggcctgaaggcgagccacgtctacaagacggcaggcagctataccgccgtcctc
accgtgaaggacaacgaaggcgccaccaatacgctggagctcccattggccgtcaccggt
ccggcgcccaacaagcctccggtggccgccgcaacggccacccagcaggcgggcaagctc
acggtgagcttcaacgccaccgcctccagcgaccccgatggcaaggtcgccagctacgcc
tggaacttcggcaacggcaagacgggcgccggcgcaacgcccagccacacctatgcggcc
gcaggcagctataacgtgaccctgacggtcaaggacaacaagggcgccaccggcagcctg
tccctgccggttacggtgaacccgcccgccgcgaacaagcctccggtcgccgccgccagt
gcgaaccagtcgggcaagctgaccgtgagcttcgacgccagcgcctcgaaggacacggac
ggcagcatcgccagctacgcctggaacttcggcgacggcaagacgggcgccggcatgaag
gtcagccacgtctacgcggcggcagggcagtaccaggccacgctgacggtgaaggacaac
aagggcgccagcgcttcgctgcccctgaccgtgacggtcaccgcaggcagcacggctgcg
acgccgtgggtctccggctattacgcaggctggttctggaacgactatcagccgcagcac
atcgacatgagcgccatgacccatgtggtcttcggccgcgtggcgccaggcggcggcacc
ctgggcggcacgccgggccagatcgtgcccggcgcaggcaccgcccacgatgcgggccag
ctgcccgccagcgtgacttcgctcagcgtcgaggacttcctcgtgcagcgcgcccacggc
gcgggcatcaaggccctgctcatgctgggcgggaatgacgatggagcgggcttctcggcc
tccaccaagcccggtgtgcgcaccaccttcatcaacaacctcgtcacctacctggccacc
cacgactacgacggcgtggacgtggactgggaagaccatatcgaaacggccgacgaccag
aaccagctgatcgccttcatcacggaactgaagcaggccgcctccatccacaaccgctac
cgcgaccgcccgctgatcgtgaccttcccgaccagcatcctgaacatgaactacgacgtg
gtgccgggctggaaggtgcaggtcgccgaactggtggaccagttcaacatcatgagctac
gagatcgccttcgcgcacggcggctggaccacctggcacttctcgccactgttcggccag
agcggcacccacccgagcgatgtgtcgagcagcgtgcaggcctatatcgacgcgggcatc
gtgccgggcaagatcggcatcggcctgggcttctacgccctgagcttcacgccgcccgta
acgggcccgaaccagaccgtgagccagatggagtcgaacgacgccacctggagctatgcg
aacctggtgaatggcggcttcctgtcggcgggcacctatgtgtgggacgacgtagcgcag
gtgggctaccgctcctacccgggcggttttaccggccatgccgaatacaacactggcacc
accggcttcctgagctacgaggacccgcgcagcatcgccgtgaaaggcaagtgggtgcgc
gagaagcagctgggcggcgccatcatctggaccatcaactacggctcgccggatggcctg
aacaacccgctgctgaacgcggtcaagcagtccttcctcatgggcgcggacagcgtgcag
ccctacgcccgcttcacctccgccatgccttcgaccacggagctgcgcttcaacttcgac
gccagccagtcggcggacgcggaagacaagccggtggccagctacagctggaacttcggc
gacggcgccaccgcaacgggcgtcaacgccagccatgtgtacgccagcgcgggccgctac
ctggtgaccctgaccgtcaccgacgccaagggcgtgagcgcgtccaccacctcctcggtg
ctggccgacttcccgccgccgccggatgaactgccgccgctggagccggtgcctgccgcg
aacggtccccgtccctgggttaccgcctactacgcgggctggttctggaacttgttcgag
ccgcagtatgtggacatgagcgccatgagccactacgtgttcggccgcgtggcgccgggc
ggcggcaccctgggcggccagccgggcgaggtggttccgggcgcgggcacggcgcaccag
ccgggcatcctgggcagcctcacgaacaagagcgtggaggattacctggtgcagcgcgcc
cacgaatccggcgtcaaggcgctgctgatgatcggcggcatgggcgacggcctgggcttc
ctgcgctcgaccacttcactcacccgtcccgtattcgtgaagaacctgctggactacctg
gaggctcacgactacgacggcatcgacctcgactgggaagacgtgctcgacaccgaccag
gccaagctccagctcacggccctcatcgccaacctgcgcgcaggcgccaaggagcgcgcc
cgctggcaggacccgtcgaaaccgttcgtgatcaccttcccgaactatgcgatgaacatg
aactacgagaccgtgccccagtggaaggtcaccgtggcctccatcgtcgaccagttcaac
ctgatgagctatgccttgggcttcaacgcggacggctggaccagcaccaccttcagcccc
atcgaaggcaagacgccgacccaccccatggacgtgagctccagcatccaggcctaccag
gacgcgggcatcgaccgcaagaaactgggcgtgggcatcggtttctacggcatgagctat
gcgccgccggtcaccgcgccgaaccagccagcgaccgccatgaacaacagcgataccagc
ctgagctacgcgcagctggtgaacgaaggctacctgagcaatggcagctatcactgggat
gacgtggccaagatgggctaccgctcctacagcggcgcgaacggcttcaagggcgcgggc
atgctgagctacgaggacgaggccagcatcgcggccaagggcaagtgggtgcgcaacacc
ggcaccggcggcgccattatctggaccatcaattacggcagtccggacggcaaggccaac
ccgctgatgaacgcggcgaagaaggccttcctgcagtaa
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