Massilia endophytica: LSQ66_03445
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Entry
LSQ66_03445 CDS
T09693
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meny03032
]
LSQ66_03445 (gyrA)
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_03445 (gyrA)
Enzymes [BR:
meny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LSQ66_03445 (gyrA)
DNA replication proteins [BR:
meny03032
]
Prokaryotic type
DNA Topoisomerases
LSQ66_03445 (gyrA)
DNA repair and recombination proteins [BR:
meny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LSQ66_03445 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UGQ47549
LinkDB
All DBs
Position
740992..743646
Genome browser
AA seq
884 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLYGMHELNNVWN
RPYVKCARVVGEVMGKYHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSIDGDNAAAM
RYTECRLDKIAGELLADIDKETVDFAPNYDGKEKEPTVLPTKLPNLLINGSSGIAVGMAT
NIPPHNLSEVINGALHVLSNPDCTVDELIELIPAPDFPTAGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGKEGGRIAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLMNLKDMLSTFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPLAKTELMAKAWDSSL
VREMLARTGEEGQAGIDAFRPEHLPKHYGMQPDGLYKLSDDQAQEILQMRLQRLTGLEQD
KIVNEYKDVMAQIADLLDILAKPARVTAIITDELTASKLEYGDKDARRSTIEHNATDLET
EDLITPQDMVVTLSHMGYMKAQPISEYRAQKRGGRGKQAMATKDEDWIDQLFIANTHDYI
LCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDNEKITVVLPLSGENRTFPEDHYV
FMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGAHDVMLFSDAGKAVRF
DENDVRPMGRTARGVRGMNLEEGQNVIALLVAENEQQSVLTATENGFGKRTPITEYTRHG
RGTKGMIAIQTSERNGKVVAATLVDSTDEIMLITTGGVLIRTRVSEIREMGRATQGVTLI
AVEDGTKLSGLQRIVEADADEPELEPEGGAAAAAEGGEPEATAE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaatccccatttccctcgaagaagagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgtgccttgccggacgcgcgcgacggc
ctgaagccggtgcaccgccgcgttctctacgggatgcatgagctgaacaatgtctggaac
cgtccctacgtgaaatgcgcccgcgtggtgggtgaagtcatgggtaagtaccacccgcac
ggcgacgcctccatctacgacacgctggtgcgcatggcgcaggacttctccctgcgctac
atgctggtggacggccagggcaatttcggctccatcgacggcgacaacgcggcggccatg
cgttacaccgagtgccggctggacaagattgcgggcgaactgctggccgacatcgacaag
gaaaccgtcgatttcgcgcccaactacgacggcaaggagaaagagcccaccgtcctgccg
accaagctgcccaacctgctgatcaacggctcctccggcatcgcggtgggcatggcgacc
aatatcccgccgcacaacctgtccgaagtgatcaacggcgccctgcacgttctgtcgaac
ccggactgcacggtggatgaactgatcgagctgattcccgcgccggacttcccgaccgcc
ggcatcatctacggcgtgtccggcgtgcgcgacggctaccgcacgggccgcggccgcgtg
gtcatgcgcgccaagacccacttcgaggaattcggcaaggaaggcggccgcatcgccatc
atcgtcgacgagctgccttaccaggtgaacaagaagtccctgctggagcgcatcgccgag
aacgtgcgcgacaagaagctggaaggcatttccgacatccgcgacgaatccgacaagtcg
ggcatgcgcgtggtgatcgagctgaaacggggcgaagtgccggaagtggtgctgaacaac
ctgtacaagcagacccagttgcaggacaccttcggcatgaacatggtggcgctggtggac
ggccagcccaagctcatgaacctgaaggacatgctgtccaccttcctgtcgcaccgccgc
gaagtggtgacgcgccgtaccgtgttcgagctgcgcaaggcgcgcgaacgcggccacgtg
ctggaaggcctggcggtcgccttggcgaacatcgacgaattcatcgccatcatcaaggcc
gcgccgacgccgccgctggcgaagacggaactgatggccaaggcctgggactcttccctg
gtgcgcgagatgctggcgcgtaccggcgaagaaggccaggcgggcatcgacgccttccgt
cccgagcacctgccgaagcactacggcatgcagccggacggcctgtacaagctctccgac
gaccaggcgcaggaaatcctgcagatgcgcctgcagcgcctgaccggcctggaacaggac
aagatcgtcaacgagtacaaggacgtgatggcgcagatcgccgacctgctggacattctg
gccaagccggcccgcgtgaccgccatcatcaccgacgaactgaccgcatcgaagctggaa
tacggcgacaaggacgcgcgccgctccaccatcgagcacaatgcgaccgacctggaaacg
gaagacctgatcaccccgcaggacatggtggtgaccctgtcgcacatgggctatatgaag
gcccagccgatctccgaataccgcgcccagaagcgcggcggccgcggcaagcaggccatg
gcgaccaaggacgaagactggatcgaccagctcttcatcgccaacacgcacgactacatc
ctgtgcttctccaaccgcggccgcatgtactggctgaaagtgtgggaagtgccgcagggc
tcgcgcaactcgcgtggcaagcctatcgtgaacatgttcccgctgcaggacaacgagaag
atcaccgtggtgctgccgctctccggcgaaaaccgcaccttcccggaagaccactacgtg
ttcatgtccaccagcctgggcaccgtgaagaagacgccgctgaaggacttcagcaacccg
cgcaaggccggcatcattgccgtggacctggacgagggcgacttcctgatcggcgcggcg
ctcaccgacggcgcccacgacgtgatgctcttctccgacgcaggcaaggcagtgcgcttc
gacgagaacgacgtgcgtccgatgggccgtaccgcgcgcggcgtgcgcggcatgaacctg
gaagaaggccagaacgtgatcgccctgctggtggccgagaacgagcagcagtccgtgctc
acggcaaccgagaacggctttggcaagcgtaccccgatcaccgagtacacgcgccacggc
cgcggcaccaagggcatgatcgccatccagacctccgagcgtaacggcaaggtggtggcg
gcgaccctggtcgattcgaccgacgagatcatgctgatcacgacgggcggtgtgctgatc
cgcacgcgcgtttccgagatccgcgagatgggccgcgcgactcagggcgtgaccctgatc
gccgtggaggacggcaccaagctctccggcctgcagcgcatcgtggaagcggatgcggac
gagcccgagctcgaacccgaaggcggcgcggccgcggcggcggagggcggcgagcccgaa
gccacggccgaataa
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