Massilia endophytica: LSQ66_03480
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Entry
LSQ66_03480 CDS
T09693
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
meny
Massilia endophytica
Pathway
meny03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LSQ66_03480 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
meny03011
]
LSQ66_03480 (rpsA)
Ribosome [BR:
meny03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LSQ66_03480 (rpsA)
Bacteria
LSQ66_03480 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UGQ47556
LinkDB
All DBs
Position
750194..751870
Genome browser
AA seq
558 aa
AA seq
DB search
MESFAALFEESLSRQDMRSGEVISAEVVRLDHNFVIVNAGLKSEAFIPVEEFKNDQGELE
VKVGDFVSVAIESLENGFGDTILSRDKAKRLASWLALEKAMESGEIVVGTVNGKVKGGLT
VLTNGIRAFLPGSLVDTRPVKDTTPFEGKTLEFKVIKLDRKRNNVVLSRRAVIEASMGEE
RQKLMETLKEGTVVTGVVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSEVLTVGQEI
TAKVLKYDQEKNRVSLGVKQLGDDPWTGLSRRYPQGTRLFGKVTNLTDYGAFVEVEQGIE
GLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLEIDEERRRISLGMKQCKANPWDDFGVTH
KKGDKVKGAIKSITDFGVFIGLAGNIDGLVHLSDLSWTEPGEEAVRKFKKGDELEAVVLA
IDVERERVSLGVKQLEGDPFNNYAAMNDKGSLVTGTVKSVEPKGAVIQLSDEVEGYLRAS
EISRDRVEDAGTHLKVGDSVEALVINIDRKARSIQLSIKAKDNAETAEAMQKMAADSSAA
SGTTSLGALLKAKMDNKN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttcgcagccctcttcgaagagtccctgtcgcgtcaagacatgcgctctggc
gaagtgatctccgctgaagtcgtgcgtctggaccacaactttgttatcgtcaacgccggc
ctgaaatcggaagctttcatccctgttgaagaattcaagaatgaccaaggcgaactggaa
gtcaaagtaggcgacttcgtttccgtggccatcgaatcgctggaaaatggtttcggcgat
accatcctgtcgcgcgacaaggccaagcgcctggcatcgtggctggcactggaaaaagca
atggaatccggcgagatcgtcgtcggtaccgtcaacggcaaagtcaagggcggcctgacc
gttctgaccaacggcatccgcgcattcctgccgggttccctggtggacacccgtcctgtg
aaggacaccaccccgttcgaaggcaagaccctggaattcaaggtcatcaagctggaccgc
aagcgtaacaacgtcgttctgtcccgccgcgccgtcatcgaagcatcgatgggcgaagag
cgccagaagctgatggaaacgctgaaagaaggcaccgtggtgaccggcgtggtgaagaac
atcaccgactacggcgcgttcgtggacctgggcggcatcgacggcctgctgcacatcacc
gacctggcatggcgccgcgtgcgtcacccgtccgaagtgctgacggttggccaggaaatc
accgccaaggtcctgaagtacgaccaggaaaagaaccgcgtgtccctgggcgtgaagcag
ctgggcgacgatccatggaccggtctgtcccgccgctacccgcaaggcacccgcctgttc
ggcaaggtcaccaacctgaccgactacggtgcgttcgtggaagtggaacagggcatcgaa
ggcctggtgcacgtgtccgaaatggactggaccaacaagaacgtggctccgaacaaggtt
gtccagctgggcgacgaagtggaagtcatggttctggaaatcgacgaagagcgtcgtcgt
atttcgctgggcatgaagcagtgcaaggccaatccttgggacgacttcggcgtgacccac
aagaagggcgacaaggtcaagggcgccatcaagtcgatcaccgacttcggcgtgtttatc
ggcctggctggcaacatcgacggcctggtgcacctgtccgacctgtcctggaccgagcct
ggcgaagaagccgtgcgcaagttcaagaagggcgacgagctggaagctgttgttctggcc
atcgacgtggagcgcgagcgcgtgtccctgggcgtgaagcagctggaaggcgacccgttc
aacaactacgctgccatgaacgacaagggttccctggtcaccggcaccgtgaaatcggtt
gagccaaaaggcgccgtgatccagctgtccgacgaagtcgaaggctacctgcgcgcttcc
gaaatctcccgcgaccgcgtggaagatgccggcacccacctgaaagtgggcgacagcgtg
gaagccctggtcatcaacatcgaccgcaaggcacgcagcatccagctgtccatcaaggcg
aaggacaacgctgaaaccgctgaagccatgcagaagatggcagctgacagcagcgccgca
tcgggcaccaccagcctgggcgcactgctgaaagccaagatggacaacaagaactaa
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integrated database retrieval system
