Massilia endophytica: LSQ66_03615
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Entry
LSQ66_03615 CDS
T09693
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
meny
Massilia endophytica
Pathway
meny02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSQ66_03615 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_03615 (xylF)
Transporters [BR:
meny02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
LSQ66_03615 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ADH_zinc_N
BRCT
Motif
Other DBs
NCBI-ProteinID:
UGQ49184
LinkDB
All DBs
Position
complement(779073..780041)
Genome browser
AA seq
322 aa
AA seq
DB search
MFALASGAAMADAKNPKIGFSIDDLRLERWTRDRDYFVAAAEKMGAKVYVQSADASEQRQ
ISQIENLISRGVDVLVIVPYNATVLNNAVREAKKSRIKVVSYDRLILNSDIDAYISFDNE
KVGEMQAQAVVAAKPKGNYYLLGGAPTDNNAKMLREGQMKVLQPLVDKGDIKIVGKQWVK
DWSPSEALAIIENALTANGNKIDAIVASNDATAGGAIQALTAQKLQGKVPVSGQDADLAA
VKRVIAGTQAVTVYKPLKVLASEAAKLSVQLVRNEKPAFNASYNNGFKKVDTLLLKPTPL
TKANINTLVDDGFYTKAQLSAN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgctggcaagcggcgcggccatggccgacgcaaagaatccgaaaatcggcttc
tccatcgacgacctgcgcctcgagcgctggacccgcgaccgcgactacttcgtggccgct
gcagagaagatgggggccaaggtgtacgtgcagtccgcggacgccagcgaacagcgccag
atctcccagatcgagaacctgatctcgcgcggcgtggacgtgctggtgatcgttccctac
aacgccacggtgctcaacaacgccgtgcgggaggcgaagaagtccaggatcaaggtggtc
tcctacgaccgcctcattctcaattccgacatcgacgcctacatctccttcgacaacgag
aaggtcggcgagatgcaggcccaggccgtggtggccgccaaaccgaagggcaactactac
ctgctgggcggcgcgcccaccgacaacaacgccaagatgctgcgcgaaggccagatgaag
gtgctgcagcccctggtggacaagggcgacatcaagatcgtgggcaagcagtgggtgaag
gactggagcccgtccgaggcgctggccatcatcgagaacgccctgaccgcgaacggcaac
aagatcgacgccatcgtggcttccaacgacgccacggcgggcggcgcgatccaggccctg
acggcgcagaagctgcagggcaaggtgccggtctccggccaggacgccgacctcgcggcc
gtgaagcgcgtgatcgcgggcacccaggctgtcactgtgtacaaacccctgaaggtgctg
gcctcggaagcggccaagctgtccgtccaactggtgcgcaacgagaagcctgccttcaat
gcctcctacaataacggcttcaagaaagtggacaccctgctcctgaaaccgacgcccctg
accaaggcgaatatcaatacgctcgtggacgacggcttctacacgaaggcccaactctcc
gccaactga
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integrated database retrieval system
