Massilia endophytica: LSQ66_03755
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Entry
LSQ66_03755 CDS
T09693
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
meny
Massilia endophytica
Pathway
meny00541
Biosynthesis of various nucleotide sugars
meny01100
Metabolic pathways
meny01250
Biosynthesis of nucleotide sugars
Module
meny_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSQ66_03755 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
meny01005
]
LSQ66_03755 (kdsB)
Enzymes [BR:
meny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LSQ66_03755 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
meny01005
]
Lipid A
LSQ66_03755 (kdsB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
UGQ47608
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Position
812677..813426
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AA seq
249 aa
AA seq
DB search
MSFIAIIPARLASTRLPNKPLADLGGKPMVVRVAERAAESGASRIIVATDHEDIRAACVQ
HGVEVCMTRADHPSGTDRIAEVARTLNLAPDSVVVNLQGDEPLIDPALLAAAASRIGPDV
PMSTCAHPLHDAADVFNPNVVKVVLDRLGRALYFSRAAIPWARDAFAASRSVLPSGYQPL
RHIGLYAYRTDFLLAYPGLAVSPLEGIEALEQLRVLWHGYPIAVHVTDSAPAAGVDTPED
LERVRRHFG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgtccttcatcgccatcattcccgcccgcctggcttcgacccggctgccgaacaagccc
ctggccgacctgggcggcaagcccatggtggtgcgcgtggccgagcgcgccgccgaatcg
ggcgccagccgcatcatcgtcgccaccgaccatgaggacatccgcgccgcctgcgtgcag
cacggcgtggaggtgtgcatgacgcgggccgaccatccctccggcaccgaccgcatcgcg
gaagtggcgcgcaccctgaacctcgcgcccgattcggtggtcgtcaacctgcagggcgac
gagcccctgatcgatccggccctgctggccgccgccgcaagccgcatcggcccggacgtg
ccgatgtccacctgcgcccatcccctgcacgacgcggccgacgtcttcaatccgaacgtg
gtgaaagtggtattggaccgcctgggccgtgccctctacttcagccgcgccgcgattccg
tgggcgcgcgacgccttcgccgcgtcccggtccgtgctgccctccggctaccagccgctg
cgccatatcgggctttacgcctaccgcaccgatttccttcttgcctatcccggcctggcg
gtttcgccgctggaaggcatcgaagcgctggaacagctgcgggtgctgtggcacggctat
cccatcgcggtccacgtgacggactcggcgcccgccgcgggcgtcgatacgcccgaagac
ctggagcgcgtacgccgccatttcggctga
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