Massilia endophytica: LSQ66_04390
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Entry
LSQ66_04390 CDS
T09693
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_04390
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF481
Motif
Other DBs
NCBI-ProteinID:
UGQ47723
LinkDB
All DBs
Position
complement(952973..954820)
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AA seq
615 aa
AA seq
DB search
MTFPVTRQATLASLAMAIAAPSFAQTTAIDAVIVTATRSPQRASEVISDTVTITADEIAR
SGVGSVTELLQRQRGIEVTRNGGPGTNSTVYIRGANSNQNIVLVDGVRIGSSTSGAASWS
SIPLSAIDRIEIVYGPLSTLYGADAIGGVIQVFTKKGKGETAVTAFAGAGSDNTREADAA
ISGGTGKFSYSLSAGKERSDGFSATKPGNFSYNGDKDGYDRKNAAGQFTVQLAPGHEAGA
LFLYSRTETQIDAGAGSFDAHSVQDLNNVAVFSRHELLPNWKMQLQLAQTRDKSGNFSGT
GPFGTSQINTKQTQFSWQNDIQLGADTLQLLAERRKEEVEANTAGLSRDRSTNSVATTYN
LKRGDHLVSVGARNDDSSQYGSKGTGSLGYGYRFTRELRLNASYGTSFRAPTFNELYYPG
FGQPDNKPEKGRNGEIGLQYNDGKTQLGAVYYRNKLSRLLVTTIPCPIPDPAFTFGCAYN
VNKATLEGLSLSAQHQLGDLALSASADLQDPKDETTHKQLARRARRHASLAAEYGAGPLR
AGVEWQLSSERFDNASNTARLGGYGLVNLFATWQFNRDWSALVRWNNVADKQYELARYYA
TAGSTVFAGLRYGMK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacctttccagtaacacggcaggcgacgctggcgtccctcgccatggctatcgccgcg
ccctccttcgcccagaccaccgccatcgacgccgtgatcgtcaccgccacccgcagcccg
cagcgcgcgagcgaagtgatcagcgataccgttaccatcactgccgacgagatcgcgcgt
tccggcgtgggctcggtgaccgagctgctgcagcgccagcgcggcatcgaagtgacccgc
aacggcggcccgggcaccaactccaccgtctacatccgcggcgcgaacagcaaccagaac
atcgtgctggtggacggtgtgcgcatcggctcctcgaccagcggcgcggccagctggagc
tccattcccctgagcgccatcgaccgcatcgaaatcgtctatggccccctcagcaccttg
tacggcgcggacgccatcggcggggtgatccaggtgttcaccaagaagggcaagggcgaa
accgccgtcaccgccttcgctggcgcaggcagcgacaacacgcgcgaagcggatgccgcc
atctcgggcggcaccggcaaattcagctactcgctcagcgcaggcaaggaacgttctgac
ggtttctcggccaccaagccgggcaacttctcctacaacggcgacaaggacggctatgac
cgcaagaacgcggcaggccaattcacggtgcagctggctccaggccatgaagcgggcgcc
ctcttcctgtacagccgcaccgaaacgcagatcgatgcaggcgccggcagcttcgacgct
cacagcgtgcaggacctgaacaacgtggccgttttcagccgccatgagctgctgccgaac
tggaagatgcagctgcagcttgcgcagacgcgcgacaagtcgggcaacttcagcggcacc
ggccccttcggcacaagccagatcaacacgaagcagacccaattcagctggcagaacgat
atccagctgggcgcggacaccctgcagctgctggccgaacgccgcaaggaagaagtggaa
gccaatacggcaggcctctcgcgcgaccgcagcaccaactcggtcgccaccacctataac
ctgaagcgcggcgaccacctggtcagcgtgggtgcgcgcaacgacgacagctcgcagtac
ggcagcaagggcaccggctccctcggctacggctaccgcttcacgcgcgaactgcgcctg
aacgccagctatggcacgagcttccgcgccccgactttcaatgaactgtactacccgggc
ttcggccagccggacaacaagcctgaaaaaggccgcaacggcgagatcgggctgcagtac
aacgacggcaagacccagctgggcgcggtgtactaccgcaacaagctgagccgtctgctg
gtgaccaccatcccctgccccatccccgatccggccttcaccttcggctgcgcctacaac
gtgaacaaggccacgctggaaggcctgtcgctgtctgcgcagcaccagctgggcgacctg
gccctgagcgccagcgccgacctgcaggatccgaaggacgaaacgacccacaagcagctg
gcgcgccgcgccaggcgccatgccagcctggccgccgaatatggcgcgggccctctgcgc
gcgggtgttgaatggcagctgtccagcgaacgtttcgacaatgccagcaacaccgcccgt
cttggcggctatggcctggtgaacctgttcgcgacctggcagttcaaccgcgactggtcc
gccctcgtccgctggaacaacgtggccgacaagcagtatgagctggcgcgctactacgca
accgccggttccacggtgtttgccggtctgcgctacggcatgaaataa
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