Massilia endophytica: LSQ66_04695
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Entry
LSQ66_04695 CDS
T09693
Name
(GenBank) RNA helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
meny03029
]
LSQ66_04695
Enzymes [BR:
meny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LSQ66_04695
Mitochondrial biogenesis [BR:
meny03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LSQ66_04695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
SUV3_C
DEAD
Suv3_C_1
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
UGQ47776
LinkDB
All DBs
Position
1021298..1023247
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AA seq
649 aa
AA seq
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MSSPSHEQDDDLLIAELGLAARNIELVKLEGRVFLRFHGVADSAGLRVPYALVPEQGVLA
KPSKWRKLDAEGRSALLRERASPAAEATLRASVESFIAELAQECEDAGLDPMSFLHALDE
VQTSEPASIVFERLRQRLLHAVEREREEQHAERTRQSINLAEYPASFETARRMPRRFIAL
LGPTNSGKTHKAMEALAKAASGVYLAPLRLLALENYERLQAAEPHGKPLAVSLITGEERR
IAPDATHVASTVEMLDSRTPVEVAVIDEIQMLADRERGAAWTAAVCGAPARTVYLVGAPE
ARRAIEALAERLECPLEVHVLKRKGPLVVEPTSVRKLKNVRKGDALIAFSRRDVLMWRDL
VTEMGLSVATVYGNLSPEVRRAQAQRFREGRADVVVGTDAIAMGLNLPIARIVLTSTVKF
NGVEEEEIPSALARQIAGRAGRYGLHEEGLVAGYDDETHGVLRALLKEKPTPLNASGFAV
APTLEHLHRIASVTGETSLAKLLKRFIHNIDVPDGFFYPRITEDQAERAEWLDTLPLSVA
DKFTLSLVPVSTKIASLQSAWEHWAVSLSRHRITHLHPEDSPLHYLSLQEVEDLCRLYSA
YAWLGYRLPEYFPDIELAQQLSREASERVDTILQDQNAAARQRHHRKFR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccatcccatgagcaggacgacgacctgctgatcgccgaactgggcctggcg
gcccgcaatatcgaactggtcaagctggaaggccgcgtcttcctgcgctttcatggcgtg
gccgacagcgccggcctgcgcgtgccctatgccctcgtccccgagcagggcgtgctggcc
aagccttcgaagtggcgcaagctcgatgccgaagggcgcagcgcgctgctgcgcgaacgg
gccagccccgctgccgaagccaccctgcgcgcgagcgtcgaatcctttatcgccgaactg
gcgcaggagtgcgaggacgcgggccttgatcccatgagcttcctgcatgcgctggacgag
gtgcagacttcggaaccggccagtatcgtcttcgagcgcctgcgacagcgcctgctgcac
gccgtggagcgcgaacgcgaggagcagcatgcggagcgcacgcgccagagcatcaacctc
gctgagtatccggcctcgttcgaaactgcgcgccgcatgccgcgccgctttatcgcgctg
ctgggtcccaccaattcgggtaagacgcacaaggcaatggaggccctggccaaagctgcc
agtggcgtttatcttgcgcctctgcgcctgctggcgctggagaactacgagcgcctgcag
gccgccgagccgcatggcaagccgcttgcggtgagcctcatcaccggcgaggaacgccgc
attgctccggatgcgacccacgtggccagcacggtggagatgctcgattcgcgcacgccc
gtggaggtggcggtgatcgacgagatccagatgctggccgaccgtgaacgcggcgccgcc
tggacggccgccgtgtgcggggcccccgcgcgcacggtgtatctggtgggggcgccggag
gcgcgccgcgccatcgaggcgctggccgagcggcttgagtgtccgctggaggtgcatgtg
ctgaagcgcaaaggaccgcttgtggtcgagcccacgtccgtgcgcaagctgaagaacgtg
cgcaagggcgatgcgctgatcgcgttttcgcgccgcgatgtgctgatgtggcgcgacctg
gtcacggagatgggcctctccgtcgccacggtctacggcaatctctcgcccgaggtgcgc
cgcgcccaggcccagcgtttccgcgagggcagggcagatgtggtggtaggcacggatgcc
attgccatgggcctcaacctgcccatcgcccgcattgtgctgaccagcacagtgaaattc
aacggcgtggaagaggaggagattccttctgcgctggcgcgccagatcgcgggccgcgcg
gggcgctatggcctgcacgaagaaggactggtggcgggctatgacgacgagacccacggt
gtgctgcgcgccctgctgaaggagaagcccacgccgctcaatgccagcggctttgccgtc
gcgcccacgctggagcacctgcaccgcattgcatcggtgacgggcgagacgtcgctggcc
aagctgctcaagcgcttcatccacaatatcgatgtaccggacggcttcttctacccgcgc
atcaccgaggaccaggccgagcgcgcggaatggctggatacgctgccgctttccgtggcg
gacaagttcaccctgtcgctggtgcccgtatcgacgaagatcgcgtcgctgcaaagcgcg
tgggagcactgggccgtttcgctgtctcgccatcgcatcacgcatctgcatcccgaggac
tccccgctgcattacctctcgctacaggaggtggaggacctgtgccgtctctactcggcc
tatgcatggctggggtaccgcctgccggaatacttccccgatatcgaactggcgcagcag
ctttcgcgcgaggcctccgagcgcgtggacaccatcctgcaagaccagaacgccgccgcg
cgccagcgccatcacaggaaattccgctga
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