Massilia endophytica: LSQ66_05195
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Entry
LSQ66_05195 CDS
T09693
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_05195
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_05195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
DUF481
Motif
Other DBs
NCBI-ProteinID:
UGQ47866
LinkDB
All DBs
Position
complement(1117202..1118239)
Genome browser
AA seq
345 aa
AA seq
DB search
MNKNIATAAALLCASFAASAQDAAINPNWYIQPSFSVMKPDSDWVTDRTGHGGGLKFGRT
VHPDWDVQVGYTYARSKENGTRYEQQTVGLDALYMFSRKTFRPFILVGLGAERDKANPFQ
SFSQPRRTSPFLSAGLGFQSSINDRWSFQADVRNVHGFLRGDTFPHSSANNVYLNLGFNY
LLGAAPAPAPVAPPPVAAEPPPPPPPVAPPPPPPPPPARFEKVTMSATELFEFDSAKLNP
NQPKLDDIARLLNENPSLSGIVITGHADRIGSKSYNQKLSLRRADSVKAYLVGKGIAADR
LTTQGKGEDEPVVQCNNKKRSDLIKCLEPNRRVEVEQITVERRVQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatattgctactgccgcagccctgctgtgtgcttccttcgccgcgtccgcg
caagacgccgcgatcaacccgaactggtatatccagcccagtttcagcgtcatgaagccg
gacagcgactgggtcaccgaccgcaccggccatggcggcggcctcaagttcggccgcacc
gtgcatccggactgggacgtgcaggtgggctacacctacgcccgctcgaaagaaaacggc
acccgctacgagcagcagaccgtgggcctggacgccctctatatgttctcgcgcaagacc
ttccgccccttcatcctggtcggcctgggcgccgagcgcgacaaggccaaccccttccag
agcttcagccagccgcgccgcacctcgccgttcctgagcgccggcctgggcttccagtcc
tcgatcaacgaccgctggtccttccaggcggacgtgcgcaatgtgcacggcttcctgcgc
ggcgacaccttcccgcactccagcgcgaacaatgtctacctgaacctgggcttcaactac
ctgctgggcgccgccccggcgccggcgccggtcgcgccgccgccggtcgcggccgaaccg
ccgccgccaccgccgccagtggctccgccgccaccgccgccaccgccgccagcacgcttc
gagaaggtgaccatgtcggccaccgagctgttcgagttcgacagcgccaagctgaacccg
aaccagccgaagctggatgacatcgcccgcctgctgaacgagaaccccagcctgagcggc
atcgtcatcaccggccacgcggaccgcatcggctccaagagctacaaccagaagctctcg
ctgcgccgcgcggactcggtcaaggcctacctggtgggcaagggcattgccgccgaccgc
ctgacgacccagggcaagggcgaggacgaacctgttgttcagtgcaacaacaagaagcgt
tcggacctgatcaagtgcctggagccgaaccgccgcgtcgaagtggagcagatcaccgtc
gaacgccgcgtgcagtaa
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