Massilia endophytica: LSQ66_06170
Help
Entry
LSQ66_06170 CDS
T09693
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
meny01011
]
LSQ66_06170
Enzymes [BR:
meny01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LSQ66_06170
Peptidoglycan biosynthesis and degradation proteins [BR:
meny01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LSQ66_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
UGQ48051
LinkDB
All DBs
Position
complement(1340939..1342255)
Genome browser
AA seq
438 aa
AA seq
DB search
MQAQIKTLTLLAALIASAAPAISQAVETSALPASAPVTTSPKAGEEAFRETDVWNRIRTG
YAIPDLNNSLVQKHISWYADRPDYIARTTARASQYLYHIVSELEKRNMPTELALLPFIES
AFNPTAVSSANAGGMWQFMPGTGRDFNLKQNAFKDDRRSILASTDAALTYLQRLYDMFGD
WQLALAAYNWGEGSVQKAIKRNQAAGKPTNFESLAELMPAETRNYVPKLQAVKNIVANPG
QFGLSLPQIQNQPYFTAVDKTSDIDLAVAAQLAELSIDEFKALNPQFKRPVITGGEQTQI
LLPKENAEKFNLNLAQWGRALSSWTTHKISSTKESIASLASRFRTTPEVIRQANNLPQRS
ILKAGSTILVPKISASAADIPADIADNATIAVEERSEKRSNYKQAKAGSSKAKAPISLVK
ARVSRADAGKSKSRRSSN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcagatcaagaccctgaccctgctggcagccctcatcgccagcgcggccccg
gcgatcagccaggcagtggaaacatccgctcttccagcttccgcccccgtcaccaccagc
cccaaagcaggcgaagaagccttccgtgagaccgacgtctggaaccgtatccgcaccggc
tacgccatccccgacctgaacaattcgctggtgcagaagcacatcagctggtacgccgac
cgtcccgactatatcgcccgcaccacggcgcgcgcctcccagtacctgtatcacatcgtg
agcgagctggaaaagcgcaatatgccgaccgagctggccctgctgcccttcatcgagtcc
gccttcaatcccaccgccgtgtccagcgccaacgcgggcggcatgtggcagttcatgccc
ggcaccggccgcgatttcaacctgaagcagaacgccttcaaggacgaccgccgttccatc
ctggcttcgaccgatgccgccctgacctatctgcagcgcctgtacgacatgttcggcgac
tggcagctggccctggccgcctataactggggcgaaggctcggtgcagaaagccatcaag
cgcaaccaggccgctggcaagccgaccaatttcgagagcctcgccgagctgatgcccgcc
gagacccgcaactacgtgcccaagctgcaggccgtgaagaatatcgtggcgaatccgggc
cagttcggcctgtccctgccgcagatccagaaccagccctacttcaccgccgtggacaag
accagcgatatcgacctggccgtggccgcccagctggccgagctgtccatcgacgagttc
aaggccctgaacccgcagttcaagcgccccgtcatcacgggcggcgagcagacccagatc
ctgctgccgaaggagaacgcggagaagttcaacctgaacctggcccagtggggccgcgcc
ctgtccagctggaccacgcacaagatcagcagcaccaaggaaagcatcgcttccctcgct
tcccggttccgcaccacgccggaggtgatccgccaggccaacaacctgccccagcgcagc
atcctgaaggccggttccaccatcctggtgcccaagatctcggccagcgccgccgatatt
cctgccgacatcgccgacaacgccaccatcgccgtcgaggaacgcagcgagaagcgcagc
aactacaaacaggccaaggccggcagcagcaaggccaaggcgccgatctccctggtcaag
gcccgcgtgtcgcgcgccgacgccggcaaatccaaatcccgccgcagcagcaactga
DBGET
integrated database retrieval system
