Massilia endophytica: LSQ66_06235
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Entry
LSQ66_06235 CDS
T09693
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_06235 (radA)
DNA repair and recombination proteins [BR:
meny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LSQ66_06235 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
GvpD_P-loop
ChlI
SLFN-g3_helicase
AAA_16
AAA_24
Lon_C
RecA_N
AAA_14
Rad51
nSTAND3
AAA
nSTAND_NTPase5
CobU
AAA_5
NTPase_1
ATPase_2
TniB
ABC_tran
MCM
PAXNEB
AAA_19
AAA_29
DAP3
NB-ARC
GvpD_bR2
Motif
Other DBs
NCBI-ProteinID:
UGQ48064
LinkDB
All DBs
Position
1355522..1356898
Genome browser
AA seq
458 aa
AA seq
DB search
MAKAKTQYTCSECGGTSSKWTGQCSSCQQWNTMVETVIESAGANRFSQSQHQSLAQTAPV
LSLSDIEAMDVPRFGTGIEEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALANMSQMK
SVLYVSGEESGAQIALRAKRLAIDARELKLQAEIQLEKILNTLAELKPQVAVIDSIQTLY
SDALTSAPGSVAQVRECAAQLTRVAKQSGVTIILVGHVTKEGALAGPRVLEHIVDTVLYF
EGDSHSSFRLVRAIKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDNQVPGSCVMVT
QEGTRPLLVEIQALVDASHLPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAV
GGVKITEPAADLAVLLAINSSMRNKALPRGFVVFGEVGLAGEIRPAPRGQERLREAAKLG
FSIAMIPKANAPKQPIEGMTIIAVDRIDDAFTRLREFH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagactcaatatacgtgcagcgaatgcggcggcaccagcagcaaatgg
accggccaatgttcctcctgccagcaatggaacaccatggtggagacggtgatcgagagc
gcgggcgcgaaccgcttctcgcagagccagcaccagtcgctggcgcagacggcgcccgta
ctgtccctgagcgatatcgaggcgatggatgtgccgcgcttcggcaccggcatcgaggaa
ttcgaccgcgtgctgggcggcggcctggtggcgggcggcgtggtgctgatcggcggcgat
ccgggcatcggcaagtccacgctgctgctgcaggcgctggccaatatgtcgcagatgaag
agcgtgctgtatgtgagcggcgaggagtccggcgcccagatcgcgctgcgcgccaagcgc
ctggccatcgacgcccgcgagctgaagctccaggcggaaatccagctcgaaaaaatcctc
aacaccctggccgagctgaagccgcaggtggcggtaatcgactcgatccagaccctgtac
tcggatgcgctgacttccgcccccggttccgtggcccaggtgcgcgaatgcgccgcccag
ctcacgcgtgtggccaagcagagcggcgtcactatcatcctggtaggccatgtgacgaaa
gagggcgctctggcgggaccgcgcgtgctggagcacatcgtggataccgtgctctatttc
gaaggcgacagccattccagcttccgcctcgtgcgcgccatcaagaaccgcttcggcgcg
gtgaacgagctgggcgtgttcgcgatgacggagaagggcctgaagggcgtgtcgaatccc
tcggcgctcttcctgtcccagcacgacaaccaggtgcccggctcctgcgtgatggtgacg
caggagggcacgcgcccgctgctggtggagatccaggcactggtggacgcgagccacctg
cccaatgcgcgccgcctttcggtgggcctggagcagaaccggcttgccatgctgctggcc
gtgctgcaccggcacgctggcattgcggctttcgaccaggacgtgttcatcaacgccgtg
ggcggggtgaagattacggaaccggccgccgacctcgccgtcttgctcgctatcaactcg
tcgatgcgcaacaaggcgctgccgcgcggtttcgtggtcttcggcgaagtgggcctggcc
ggtgaaatccggcccgcgccgcgcggccaggagcggctgcgcgaagcggccaaactgggc
ttctccattgccatgattccgaaggcgaatgcaccaaaacagcccatcgagggcatgacg
attattgccgtcgaccgcatcgacgatgcatttacgcgactgcgcgaatttcactga
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