Massilia endophytica: LSQ66_06305
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Entry
LSQ66_06305 CDS
T09693
Name
(GenBank) DeoR family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meny03000
]
LSQ66_06305
Transcription factors [BR:
meny03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LSQ66_06305
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_5
DprA_WH
HTH_Mga
HTH_PafC
CggR_N
TrmB
MarR_2
HTH_24
Mito_fiss_Elm1
HTH_IclR
FaeA
PaaX
HTH_20
Put_DNA-bind_N
Penicillinase_R
TFIIE_alpha
HTH_AsnC-type
Fe_dep_repress
AprA_N
Motif
Other DBs
NCBI-ProteinID:
UGQ48077
LinkDB
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Position
complement(1371301..1372068)
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AA seq
255 aa
AA seq
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MRNSSQRRATILQALTQNGSVQVNQLVEQLGVSAVTIRSDLSVLESQGLATRSHGGATLM
RTPPTEHTIPQKDALNHEQKERIGAFAARMVEPGDNIIIDSGTTTISLARHLRSAKDVTV
MTNGLNIAWELADAPGVDLILTGGLLRKQSLSIQGTQAEACLMAYSFDKLFLGVDGFDLQ
FGVTTHHEAEASLNHKMVERAKKIIVLTDASKFGRVSLHRIVQLNRVHTVITDAGISQEY
REGLRDAGIELLIAE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaattccagccagcgccgcgccaccatcctgcaagccctgacccagaacggttcg
gtacaggtgaaccaactggtcgagcagcttggcgtttccgcagtcaccatccgcagcgac
ctgagtgtgctcgaatcacagggactggccacccgcagccacggaggcgcaaccctcatg
cgcaccccgcccacggagcacaccattccgcagaaggacgcgctcaatcacgagcagaag
gaacgcatcggcgccttcgccgcgcgcatggtggagccgggcgataacatcatcatcgat
tccggcaccaccaccatctcgctggcgcgccacctgcgcagcgcgaaggacgtgacggtc
atgaccaatggcctgaacatcgcctgggagctggcggatgcgccgggggtggacctgatt
ctcacgggcggcctgctgcgcaagcagtcgctctccatccagggcacccaggccgaggcc
tgcctgatggcgtacagcttcgacaagctgttcctcggcgtggacggcttcgacctgcag
ttcggcgtcaccacccaccatgaagccgaggcgagcctgaaccacaagatggtggagcgg
gccaagaagatcatcgtccttaccgacgcttccaaattcgggcgcgtcagcctgcaccgc
atcgtgcagctgaaccgcgttcacactgttatcaccgatgctggcatcagccaggaatac
cgcgaaggcttgcgggatgctggcatcgaattgcttatcgcggaatag
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