Massilia endophytica: LSQ66_06765
Help
Entry
LSQ66_06765 CDS
T09693
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
meny
Massilia endophytica
Pathway
meny02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSQ66_06765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_06765
Enzymes [BR:
meny01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LSQ66_06765
Transporters [BR:
meny02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LSQ66_06765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_16
RsgA_GTPase
AAA_29
nSTAND1
NB-ARC
AAA_25
MMR_HSR1
nSTAND3
Rad17
Motif
Other DBs
NCBI-ProteinID:
UGQ48161
LinkDB
All DBs
Position
1492101..1493903
Genome browser
AA seq
600 aa
AA seq
DB search
MKSDLQTGAPQASQLRRLAAYLLPYRLRMAGATVALLFETAAAVVAPLLVVRMLEEAVRG
GDAAALDRGMLLMMGAFLLQAAAHFVQSYQLGYIGERVVFDLRSALYQHVQYLQLGFHSA
NSVGNLTSRLSSDVTQMRAMLTNNVTQMLSQGLMLAGSVAILVRLHAHYAVLVLGLIAAS
MAIAGKLGKRIDEDSQSIQNRLAESTDAVEQGLQGIYVVKAFGREGHEVERYRGTMERMF
SAALRLNSNRALLGSALEFLAWGFIGIVMWYGGREVIGGRLSLAMVTGFLFYGLNISTSV
RALGDLFGQARAALGGASRVFEILDTAATVKDRPDAIAAPPIQGRLAFRGVRFAYDGRSA
VLKGITLDIRPGEILALVGPSGAGKSTLCNMILRFYDPDAGGIELDGRDLRSLTQASLRA
GIGIVPQETLLFGGTVRDNILYGRLDATEAEVVAAAQAANAHEFILKLPSGYDTLVGQRG
TNLSGGQRQRIAIARALLKDPPILLLDEPTSALDNESEELVQNALHRLMQGRTTLIIAHR
LSTIRAAHRIAVLDDGQVTELGTHEELMRQGALYAALYARQFRDLPQRAQPAPALSDALC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgatttgcaaacgggggcgcctcaggcgtcccagctgcgccgcctggccgcc
tacctgctgccgtaccgcctcaggatggccggagccacggtggccctgctgttcgagacg
gcggccgccgtggtggcgccgctgctggtggtgcgcatgctggaggaagcggtgcgcggc
ggcgacgccgctgccctggaccgtggcatgctgctcatgatgggcgccttcctgctgcag
gcggccgcccatttcgtgcagtcctaccagcttggctacatcggcgagcgcgtggtgttc
gacctgcgcagcgcgctgtaccagcatgtgcagtacctgcagctgggtttccattccgcg
aattcggtcggcaatctcacctcgcgcctgtccagcgacgtcacgcagatgcgcgccatg
ctgaccaataacgtcacgcagatgttgagccagggcctcatgctggcgggatcggtcgcg
atcctggtgcgcctgcatgcccactatgcggtgctggtgctgggcctcatcgcggccagc
atggccatcgcgggaaaactgggaaagcgcatcgacgaggacagccagtccatccagaac
cgcctggccgaatcgacggatgcggtggagcagggcctgcagggcatctatgtggtgaag
gcctttgggcgcgaagggcacgaggtggagcgctaccgcggcacgatggagcgcatgttc
agcgccgcgctgcggctcaattccaaccgcgcgctgctcggttccgcgctggagttcctg
gcctggggcttcatcggcatcgtcatgtggtacggcgggcgcgaagtgatcggcggccgc
ctgagcctcgccatggtgaccggcttcctgttctatggcctgaacatctccacatcggtg
cgggccctgggggacctcttcggccaggcgcgtgcggcgctgggcggcgccagccgcgtg
ttcgagatcctcgatacggccgccacggtcaaggaccggcccgacgccatcgccgcgcca
cccatccaggggcgccttgccttccgcggcgtgcgctttgcctacgatggccgctccgcg
gtgctgaagggcataacgctcgacatccggccgggagaaatcctggccctggtgggcccc
agcggcgcgggcaagagcacgctgtgcaacatgatcctgcgcttctacgatccagacgcc
ggcggcatcgagctcgatgggcgcgacctgcgttcgctgacgcaggcctcgctgcgcgcc
ggcatcggcatcgtgccccaggagaccctgctgttcggcggaacggtgcgcgacaatatc
ctgtacggcaggctggatgcgaccgaggcggaggtcgtggcagcggcgcaggcggccaac
gcgcacgagttcatcctgaagctgccgtccggctacgacaccctggtcggccagcgcggc
acgaacctgagcggcgggcagcggcagcggatcgccatcgcccgcgcgctgctgaaggac
ccgcccatcctgctgctcgacgagccgaccagcgccctggacaacgagtccgaggagctg
gtgcagaacgcgctgcaccggctgatgcaggggcgcaccacgctcatcatcgcccaccgc
ctcagcaccatccgcgccgcgcaccgcatcgccgtgctggacgacggccaggtcactgaa
ctgggcacccatgaggaactgatgcgccaaggcgccctgtacgcggcgctctatgcgcgc
cagttccgcgaccttccacagcgcgcccagcccgctcccgcgctgagcgatgcgctctgc
tga
DBGET
integrated database retrieval system
