Massilia endophytica: LSQ66_07020
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Entry
LSQ66_07020 CDS
T09693
Name
(GenBank) DUF4214 domain-containing protein
Organism
meny
Massilia endophytica
Motif
Pfam:
SWM_repeat
DUF4214
DUF2808
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
UGQ49212
LinkDB
All DBs
Position
1555267..1561236
Genome browser
AA seq
1989 aa
AA seq
DB search
MTYTEASMLDAANAAAAGAFTVMAGGSSVTVNSVAVNAAANTVTLTLASAVTHGQAVTVA
YTDPTGGDDTNAIQDVAGNDAATLGATAVTNNTPDTTAPAVTGNISVPADAVYAEGQTLS
FTVTFDENVTVSGTDSSLALTIGSTARSASYFSKSGATVTYHYTVQAGDLDANGISVGAL
SLGTSTIQDAAGNNATLTLTGHIPTLTGILVDTAAPVFASAVVNGTSLVLTYTDDSQLDA
GNGPIPGHFNVEADGATVTISSVSVNAAAKTVTLTLASAVAFGQAVTVAYADGSPSNDPT
GIQDAAGNDAASLSTTAVTNNTPDITAPVFASATVNGASLVLAYNDASTLDAVNVPAAGD
FAVTVGGSARAVNSVSVDAAAKTITLTLASAAGYAEAVTVAYTDPTAGNDTNAIQDAAGN
DAASLGVTPVTNNTPDTTAPVFASAAVNGTSLVMTYTEATTLNGVNVAAAGAFTVMAGGS
PVTVNSVSVNAAAKTVTLTLATAVGYAEAVTVAYTDPTGGNDANAIQDAAGNDAATLGAT
AVTNNTPDTTGPVFASAEVNGSTLVMTYTEATTLDAVNAPAAGAFTVMAGGSAVTVNSVS
VNAAAKTVTLTLASAVANGQAVTVAYADPTGGNDANAIQDAAGNDAATLGATAVTNNTPD
TTAPALASAAVNGTSLVLTYTDVNTLDAVNTAAAGDFTVMAGGSPVTVNSVTVNAGAKTV
TLTLASAVNPGESVTVAYSDPTGGNDANATQDAAGNDAASFGATAVTNNTPDATAPVFAS
AAVDGATLVMTYTEATTLDGTNVPAAGAFTVMAGGSAVTVNSVAVDANAKTVTLTLASAV
ITGQAVTVAYNDPTGGDDSNAIQDIGGNDAATLGATAVTNNTVDTTAPVFASAAVNGTSL
VMTYTEATTLDAGNAPAAGRFTVMAGGSAVTVNSVSVDAAAKTVTLTLASGVVAGQAVTV
AYADPTGGNDANAIQDASGNDAVTLSATTVTNNTPDVAAPVFASAAVNGASLVMTYTDAS
QLDAGNPPAIGDFAVMAGGSPVSVSSVSVNAAAKTVTLTLASAVTPGQAVTVAYTDPTIG
NDGNAIQDAAGNDAITLGATAVTNNTPDVTAPVFASAAVNGATLVLTYTEATTLDATNVP
AAGAFTVMAGGSAVTVSSVSVNAAAKTVTLTLASAVAPAQAVTVAYADPTGGNDTNAIQD
AAGNDAATLGATSVTNNTVDTTAPVFASAAVNGTLLVMTYTEASTLDGVNAPAAGAFTVT
AGGSAVSVSSVSVNAAAKTVTLTLASGVTAGQAVTVAYADPTGGNDTNAIQDAAGNDAIT
LAATAATNNTPDVTAPVFASATVNGTTLVMTYTEAVSLDAVNGPAAARFAVTAAGSAVAV
SNVVVDANAKTVTLTLATAVTNGQAVTVAYTDPTGGNDANAIQDAAGNDAVTLGATAVTN
NTPVPSPSTPPTTSTVDGVAVQTGTVANSDGSVSTVVTIPVVTTGRVEEVGDNTVADIPL
VKNSSGTSLLTVQVPVGVGLQASGPGQAKTAGSSLTDLIREIKAHTTSGSADQNSLTGGG
TGFLGDLQSSTPLLVQTVVTAGNTPGSNALTISGQPTAAGETQVALVIDTRSQTSGVNIE
LQNVEFAAIIGTANVSGGSGSQKVWGDSASQTIFLGADDDVLHGGGGNDTVGSAGGNDRV
YGDEGNDIVFGGEGDDYVDGGTGLDIARFSGRSDAYSLRMSNDKLVMTAKSGTDGVDTVV
SVETLRFIGGQGMGTSENVLARLYEGLLHRSASAAEVAFWQDKEARGATMHDIAASIAGS
TEAVAVNGASNLSFVTGLYQNVLGRAASSQEADFWLGKMAGGMDRATVALGFVNSTEKLA
AAVNVDFNHSDVAVLVRMYNTMFGRAADEAGLNYWLAKHEQGMTMGAIADAFTTSSEAQA
LQQPGGDAAFINQLYLLGMHRAPTAAESLALQGLMQQGVFDRGQVLLNVAESAESITLVG
TINTSIDLA
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgacctacaccgaggcgagcatgttagacgcggcgaatgcggcagccgctggtgccttt
acggtgatggcaggaggctcctccgtcacagtcaacagcgtagccgtgaacgccgccgct
aacaccgtcaccctgacgctcgccagcgcggtgacgcacggacaggcagtcaccgtggcc
tacactgacccgaccggcggcgacgacacgaacgcaattcaggacgttgcaggaaatgac
gcggccaccctcggtgcgacggccgtcaccaacaatacgcccgacaccactgcgccagca
gtcaccggcaatatctccgttccggctgatgcggtctatgctgaaggtcagaccctgagc
tttaccgtcacctttgacgagaacgtgaccgttagcggcaccgatagcagtcttgcgctg
accatcggaagcaccgcgcggagcgccagctacttctcaaagtccggcgccacggtaact
tatcactatacggtgcaggcaggcgacctggatgccaatggcatctcggtaggggctctt
tcacttggcaccagtacgatccaggacgcggccggcaacaatgccacgctgacgctgacc
ggccatattccgacgctgactggcattctggttgatactgcggcgccggtctttgcgtcg
gcggtagtgaatggcacctcgctggtgctgacgtacaccgatgactcccagctcgacgct
ggtaatggcccaatcccaggtcatttcaatgtggaggcggacggtgcaaccgtcacaatc
agcagcgtgtccgtgaacgccgccgccaaaaccgtcacactgacgctggcgagcgctgtg
gccttcgggcaggccgttaccgtagcctacgctgacggctccccaagcaatgatccgacc
ggcatccaggacgctgcaggcaacgacgccgcatcgctcagcaccactgcggtcaccaat
aacacgcctgatatcacggcgccggtctttgcgtcggcgaccgtcaacggtgcatcgctg
gtgttggcctataacgatgccagcactctggacgccgtgaatgtccctgctgcaggggat
tttgccgtgacggtgggcggttctgcgcgcgccgtcaacagcgtatctgttgacgccgcc
gccaagaccatcacgctgacgctagcaagcgccgccgggtacgccgaggcagttactgta
gcctacactgaccccactgcaggcaacgataccaacgcgatccaggacgctgcaggcaat
gacgccgcgtcgcttggcgtcacgcccgtcaccaacaatacgcccgacacgacagcgccc
gtttttgcctcggcagccgtcaacggcacttcgctggtgatgacctacaccgaagctaca
acgctgaacggggtgaatgtcgccgccgcaggcgccttcacggtgatggcaggcggttcg
cctgtcactgtcaacagcgtgtcggtgaacgccgctgccaagacggtgacgctgacgctg
gccaccgctgtaggctacgccgaagcagttactgtcgcctacaccgatccgaccggcggc
aacgacgccaacgctatccaggacgcggcaggcaacgatgctgctacgcttggcgcaacg
gcagtcaccaacaacactccagacactacgggcccggtctttgcgtccgcagaagtcaat
ggcagcacgctagtgatgacctacaccgaagccactactctcgatgctgtgaatgcgccc
gccgctggcgccttcactgtcatggcgggtggctcggccgttaccgtcaacagcgtgtcg
gtcaacgctgccgccaagaccgtcacgctgaccttggccagcgcggttgcgaacggccag
gccgtcaccgtcgcttatgccgacccgactggcggcaacgacgcgaatgcaatccaggat
gcagcaggcaacgacgctgccacgctgggagccaccgccgtcaccaacaacacgcccgat
accacggctcctgcgcttgcttcggcagctgtcaacggcacttcgctggtgctgacctac
actgatgtcaacacgctggatgcagtaaataccgcggcggctggcgacttcaccgtcatg
gcaggcggctcgccggttaccgtcaacagcgtaacggtgaacgctggcgccaagactgtc
acgctgacgctggcgagcgccgtgaatcccggcgaatcggtcaccgtcgcctacagcgat
ccgaccggcggcaacgacgccaatgcgacccaggacgcagcaggcaatgatgcggcctcg
tttggtgcaacggctgttaccaacaacaccccggatgccacggcgccagtcttcgcctct
gccgccgtggatggcgccacgctggtgatgacttataccgaagcgaccactctggatgga
acgaacgttcccgcagccggagcgttcaccgtgatggcgggcggctcggccgtcactgtc
aacagcgtggcggtggacgccaacgccaagacggtgacgctgacgctggccagcgcggtg
atcaccggccaggccgtcacggtggcctacaacgacccgacgggcggcgatgactcgaac
gcaatccaggatatcggcggcaacgacgctgccacgctcggcgccacggcagtgacgaat
aacaccgtggatacgacggcccctgtatttgcctccgccgccgtcaacggcacctcgctg
gtcatgacctataccgaagccacgaccctggacgcaggcaatgcgcccgcggctggccgc
ttcacggtcatggcggggggctcggcggtcaccgtgaacagcgtttcggtggatgcggcg
gccaagaccgttacgctgacgctggcgagcggcgtcgttgccggacaggctgttaccgtt
gcctatgccgacccgacgggtggcaacgatgcgaacgcgatccaggatgcatcgggcaac
gacgcggttaccctgagcgcgaccaccgtcaccaataacacgccggacgttgctgccccg
gtcttcgcttctgccgccgtcaacggcgcctcgctggtgatgacctacaccgatgcgtcc
cagctcgatgcggggaatccgccagccattggcgactttgccgtgatggcgggcggttcg
ccggttagcgtcagcagtgtttctgtaaacgcggccgccaagaccgttacgctgaccctg
gcgagcgcggtgacgcctggccaggccgtgaccgtggcctacaccgaccctaccatcggc
aacgatgggaatgccattcaagatgcggcgggtaacgacgccatcacgctcggcgcaacg
gccgtcaccaacaatacgcctgatgtcacagcgccggtcttcgcttccgcagccgttaat
ggcgccacgctggtgctgacttataccgaagcgacgacgctggatgcgacgaacgttcca
gcagctggagcatttaccgtcatggcgggtggttcggccgttaccgtcagcagcgtatcg
gtgaacgccgctgcgaagaccgtcacgctgacgctggcgagcgcggtagctcctgcccag
gccgtcacggtggcctacgccgatccaaccggcggcaacgacaccaacgcgatccaggat
gccgcgggcaatgatgccgccacgctcggtgcgacttctgtcaccaacaacacggtggac
acgacggctccggtattcgcttctgcagccgtcaacggtaccttgctggtgatgacctac
accgaagccagcacgctggatggagtaaatgctcccgcagcgggcgcgtttaccgtgacg
gcaggcgggtcggccgtcagtgtcagcagcgtgtcggtcaacgccgccgccaagacggtt
acgctgacgctggccagcggagtcaccgcgggccaggctgtcactgtggcctacgctgac
ccgaccggcggcaacgacacgaacgcgatccaggatgcggcaggcaacgacgccatcacc
ctcgcggcgactgccgccaccaacaacactccggatgtcaccgcgccggtctttgcttcg
gccaccgtcaacggcaccaccctcgtgatgacgtacacggaagcggtgtcgctggatgct
gtcaatggcccggcggccgcgcgctttgccgtgaccgcagccggttctgcagttgccgtc
agcaacgtcgtcgtcgatgccaatgcgaagaccgtcacgctgacgcttgcaaccgctgtt
accaatggccaggcggtcacggttgcgtacaccgatccgaccggtggcaacgacgccaac
gcgatccaggacgcggcaggcaacgacgccgtgacgctcggcgccacggctgtcaccaac
aacactcccgtgcccagcccttcgacaccgccaaccaccagcacggtggacggtgtggcc
gtgcagaccggcactgtggccaacagcgatggttccgtatcgacggtggtgacgattccg
gtcgtgacgaccgggcgcgttgaggaagtgggcgacaacaccgttgccgatatcccgctg
gtgaagaactccagcggcacctcgctcctgacggttcaggtgcccgtgggcgtgggcctg
caggccagcggtcctggccaggcgaagaccgcgggcagttcgttgacggacctgatccgc
gagatcaaggcccacaccaccagcggttcggcggaccagaattcgctcaccggcggcggc
actggcttcctgggcgacctgcaaagcagcacgccgctgctggtgcagaccgtcgtcacc
gcgggcaatacgccaggcagcaatgccttgaccatcagcggccagccaacggctgcgggc
gaaacccaggtcgcgctggtaatcgatacgcgctcgcagacgagcggtgtcaatatcgaa
ttgcagaacgtggagttcgcggccatcatcggcacggcgaatgtcagcggcggttccggc
tcccagaaggtgtggggcgatagcgccagccagacgatcttcctcggtgcggatgacgac
gtgctgcacggcggcggcggcaacgacaccgtgggcagcgcaggcggcaacgaccgcgtc
tatggcgacgagggcaacgacattgtgttcggcggcgaaggggacgactatgtggacggc
ggcacgggcctggacattgcccgcttcagtggccgcagcgacgcttattccctgcgcatg
tcgaacgacaagctggtgatgacggcgaaatccggtaccgacggcgtcgacacggtggtg
tcggtggaaacgctgcgcttcatcggcgggcagggcatgggcaccagcgagaacgtactg
gcgcgcctctacgagggcctgctgcatcgctcggcctccgcggcggaagtggccttctgg
caggacaaggaagcgcgcggcgccaccatgcacgatatcgctgcctccatcgccggttcg
acggaagcggtggcagtgaatggcgccagcaatctgtccttcgtcaccggcctgtatcag
aacgttctgggccgcgccgcgtcgagccaggaggcagacttctggcttggcaagatggct
ggcggcatggaccgcgcgaccgtggcgctgggcttcgtcaattcgacggagaagctggcc
gccgcggtgaacgtggacttcaaccacagcgacgtggccgtactggtgcgcatgtataac
accatgttcggccgcgctgccgacgaggcaggcctgaactactggctggccaagcacgag
cagggcatgacgatgggcgcaattgcggacgcgttcaccacttcctcggaagcgcaggcc
ctgcagcagccgggcggcgatgcggcgtttatcaaccagctctacctgctgggcatgcac
cgcgcgccgacggcggcggaatcgctggccctgcaaggcctgatgcagcagggcgtgttc
gaccgtggacaggtgctgctcaatgtggcggaatcggctgaaagcatcacgctggtgggc
accatcaacaccagcatcgacctcgcgtaa
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