Massilia endophytica: LSQ66_07410
Help
Entry
LSQ66_07410 CDS
T09693
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_07410
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_07410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
UGQ48283
LinkDB
All DBs
Position
1637845..1640034
Genome browser
AA seq
729 aa
AA seq
DB search
MPRNTVLRLTLAAAAVAAACAAHAQTVQPEEKTKPEPKQGPMQKVEVKGSTEAYDPRRDD
TASKIVISNEEIVRYGDQSISDVLKRVPGVTVGGGGRGGGDIRMRGLGSGYTQILLNGER
APAGFSIDSLSPDVIERIEVLRAASAEFSTQSIAGTINIVLKKAIKTGQRELKLSAGKSH
EQFTPFASLQVSDKVGQMSYSIGANLFKGIFDRQSPVHETLVDPSGALQMQRDTRQTDHG
RPQGVNISPRLNWNLAGGDTLTSQSFINFNRFDGASDAVIDTPVGKRPTYQVMDTDFSNH
NAFVRTDLNWVHKLAGGGKLDTKIGLNALRNTGYWHQFGYDLGALRRDSTVLSKTTEHGF
SSTGKYSTPLIPDHALAMGWDGGIAWRDDSRIQRDVNLPGSHPENSDEGYDAKVSRMAFY
GQDEWNITPRWSMYAGLRWEGLFTESEGSTFERIKQNNSVWSPIAQTLYKLPNSKDQLRL
ALTRTYKAPPASNLIPRRFTSSNNSQTDPDRRGNPDLKPELASGIDASYEHYWAQNALLS
ASASMRRISGYTRQGVVKEGDRWVSMPVNEGRATTRSIELEAKFPLSAIMSDAPSVDLRA
SANRNWSKVDSVPGPDNRLDQQVPFSATLAADYKSKDGKLTLGSSYAFKNGGHVRISDKQ
SAYQSVRRDLEAYALWKFDPKLQLRVAVSNLLTQDFISDSAYTDDSGTLRRTAVLPGYVT
TRATLEMRF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaacactgttttacgcctcaccctggctgccgccgccgtggctgccgcctgc
gccgctcacgcccagactgtccagcccgaagaaaagaccaagccggaacccaagcaggga
ccgatgcagaaagtggaagtgaagggctccaccgaagcctacgacccgcgccgcgacgac
acggccagcaagatcgtgatctccaacgaggagatcgtgcgctatggcgaccagtccatc
agcgatgtgctcaagcgcgtcccgggtgtgaccgtgggcggaggagggcggggcggcggc
gacatccgcatgcgtggcctgggcagcggctacacgcagatcctgttgaacggcgaacgt
gcacccgccggtttttccatcgacagcctgtcgccggacgtgatcgagcgcatcgaagtc
ctgcgcgccgccagcgccgagttcagcacccagtccattgcgggcaccatcaatatcgtg
ctgaaaaaggccatcaagaccggccagcgcgagctcaaactcagtgcgggcaagagccac
gagcagttcacgcccttcgccagcctgcaggtatcggacaaggtgggccagatgtcctac
tcgatcggcgccaacctgttcaagggaatcttcgaccgccagtcccccgttcacgaaacc
ctggtcgacccttccggtgcgctgcagatgcagcgtgacacccggcagaccgaccatggc
cgtccccaaggcgtcaatatctcgccgcgcctgaactggaacctcgctggcggcgacacc
ctcacttcgcaatccttcatcaacttcaaccgcttcgatggcgccagcgatgccgtgatc
gatacgccggtaggcaagcggcccacctaccaggtgatggatacggacttctcgaaccat
aacgcctttgtgcgtacggacctgaactgggtgcacaagctggcgggcggcggcaagctc
gataccaagatcggcctcaatgccctgcgcaacacgggctactggcaccagttcggctac
gacctgggcgcgctgcggcgcgacagtacggtgctgagcaagaccacggaacacggcttc
tccagtaccgggaaatactccacgcccctgattccggaccacgccctggccatgggctgg
gacggcggcatcgcctggcgcgacgactcgcgcatccagcgcgacgtgaacctgcccggc
agccatcccgagaattcggacgagggctacgacgcgaaggtgagccgcatggccttctat
ggccaggacgagtggaacatcactccgcgctggtccatgtacgcgggcctgcgctgggag
ggcctgttcaccgagagcgagggcagcaccttcgagcgcatcaaacagaacaacagcgtc
tggagccccatcgcccagaccctgtacaagctccccaacagcaaggaccagctgcgcctg
gccctcacccgcacctacaaggcgccgcccgcctcgaacctgattccgcgccgcttcacc
tccagtaacaacagccagaccgacccggaccgccgcggcaatccggacctgaagccggag
ctggcctcgggcatcgacgcctcgtatgagcactactgggcgcagaacgccctcctgagc
gccagcgcctcgatgcggcgcatcagcggctatacgcgccagggcgtggtcaaggaaggc
gaccgctgggtctccatgccggtcaacgaaggccgcgccaccacgcgcagcatcgaactg
gaagcgaagttcccgctcagcgccatcatgagcgatgcgccatccgtggacctgcgcgcg
agcgccaaccgcaactggtcgaaggtcgactccgtgcccggcccggacaatcgcctggac
cagcaggtgccgttctcggccaccctggcggcggactacaagagcaaggacggcaagctg
accctgggcagcagctacgccttcaagaacggcggccatgtgcgcatcagcgacaagcag
tcggcctaccagtcggtgcggcgcgacctcgaagcctacgcgctgtggaagttcgatccc
aagctccagctgcgcgtggccgtatcgaacctgctgacccaggacttcatcagcgactcg
gcctacacggacgacagcggcacgctgcgccgcacggcggtcttgccgggctacgtgacc
acccgcgccacgctcgaaatgcgtttctga
DBGET
integrated database retrieval system
