Massilia endophytica: LSQ66_08065
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Entry
LSQ66_08065 CDS
T09693
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
meny
Massilia endophytica
Pathway
meny00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LSQ66_08065 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
meny01007
]
LSQ66_08065 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meny03016
]
LSQ66_08065 (lysS)
Enzymes [BR:
meny01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LSQ66_08065 (lysS)
Amino acid related enzymes [BR:
meny01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LSQ66_08065 (lysS)
Transfer RNA biogenesis [BR:
meny03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LSQ66_08065 (lysS)
Prokaryotic type
Other AARSs
LSQ66_08065 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UGQ48411
LinkDB
All DBs
Position
complement(1787620..1789149)
Genome browser
AA seq
509 aa
AA seq
DB search
MTTENHDQAPGQDDNKIIAERRAKLAAIREKGVAFPNDFTPQHKAADLHVQYGGKSREEL
EAAPVTVTLAGRMMLKREAGKKAAFATLQDSSGQRADGRIQIYATLDLTGEAAMEALHHY
DLGDILGVTGTLFKTKTDELTIKVSELRLITKSLRPLPDKFHGLADQETKYRQRYVDLIM
NEETRRTFKARTAAISSIRRFMEKNDFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFL
RIAPELYLKRLVVGGFDRVFEINRNFRNEGVSIRHNPEFTMMEFYAAYTDYEWIMTFTES
VIRQAAVDAHGSAVLTYGGRELDLSKPFHRLTIVGAINKYAPHYTEAQLNDEAFLKAELL
KFGVKPHAHSGLGALQLGLFEETAEAQLWEPTFIIDYPAEVSPLARASDTRAGITERFEL
FMVGREIANGFSELNDPEDQAARFLAQVEAKEAGDDEAMFYDADYIRALEYGMPPAGGCG
IGIDRLMMLLTDSPNIRDVLLFPHLRRED
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactacggaaaatcacgatcaggcgccaggccaggacgacaacaaaatcatcgccgaa
cgccgcgccaagctggctgcgatccgcgagaaaggcgtcgccttcccgaacgacttcacg
ccccaacacaaggcagcggacctgcatgtgcagtacggcgggaaatcgcgcgaggagctg
gaagccgcgcccgtgaccgtaaccctggctggccgcatgatgctgaagcgcgaggcaggc
aagaaggccgccttcgccaccctgcaggattcctccggccagcgcgccgacggccgcatc
cagatctacgccaccctggacctgaccggcgaagccgccatggaagcgctgcaccactac
gacctgggcgacatcctgggcgtgaccggcaccctgttcaagaccaagaccgacgaactg
accatcaaggtcagcgaactgcgcctcatcaccaagtccctgcgcccactgccggacaag
ttccacggcctggccgaccaggaaaccaagtaccgccagcgctacgtggacctgatcatg
aacgaggagacccgccgcaccttcaaggcgcgcacggctgccatttcctcgatccgccgc
ttcatggagaagaacgacttcatggaagtggaaaccccaatgctgcacccgattccgggc
ggcgcggcggcaaagcccttcatcacccaccacaacgcgctggacatgcagatgttcctg
cgcatcgcgcctgagctctacctgaagcgcctggtggtgggcggtttcgaccgcgtgttc
gagatcaaccgcaacttccgcaacgaaggcgtgtcgatccgccacaaccccgaattcacg
atgatggagttctacgcggcctacacggactacgagtggatcatgaccttcacggagtcc
gtgatccgccaggccgcagtggatgcccacggttcggccgtgctgacctacggcggccgg
gagctggacctctccaagcccttccaccgcctcaccatcgtcggcgccatcaacaagtac
gcgccgcactacaccgaagcgcagctgaacgacgaagccttcctcaaggcggaactgctg
aaattcggcgtgaagccgcacgcccactcgggcctgggcgcgctgcaactgggcctgttc
gaggaaacggcggaagcgcagctgtgggagccgaccttcatcatcgactacccggccgag
gtatcgccgctggcgcgcgcatccgacacccgtgccggcatcaccgagcgcttcgagctg
ttcatggtgggccgcgaaatcgccaacggcttctcggagctgaacgatcccgaagaccag
gccgcgcgcttcctggcgcaggttgaggcgaaggaggccggtgacgacgaagccatgttc
tacgacgccgactacatccgcgccctggaatacggcatgccgcccgccggcggctgcggc
atcggcatcgaccgcctcatgatgctgctcaccgactcgcccaacatccgcgacgtcctc
ctcttcccgcacctgcgccgcgaagactga
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