Massilia endophytica: LSQ66_08490
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Entry
LSQ66_08490 CDS
T09693
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_08490
Transporters [BR:
meny02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LSQ66_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_22
Zn_ribbon_3
SbcC_Walker_B
MMR_HSR1
DUF87
DZR
AAA_25
6PF2K
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UGQ49218
LinkDB
All DBs
Position
complement(1879691..1881868)
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AA seq
725 aa
AA seq
DB search
MEVDLDARLRFVKGFILLTERRIMARGPGESQWKHWEYREGMTLKLHDHAGVGHLELFDA
HGRLDCWRFTLGQNLHAIRLSEQFGPLLQSHLTGKPIEREEEHACPTCKAPLEPDQEECP
ICAKVEYTPPTTWTLFRLWRFAHPYRWALLGGFVLMLLSTGAHLIPPYLSIPLTDNVLVP
YQNGQPVDTGLVVLYMSGLLASAVLAWILGWGKTYVLALVSERIGADLRTNTYEHLLRLS
LEYFGGKRTGDLMSRIGSESDRICVFLSLHLLDFASDCLLIIMTGVIMFTINPWLAIVTL
VPLPFIAWLIHLVRDKLRTGFEKIDRVWGEVTNVLADTIPGIRVVKAFAQEAREANRFRI
ANKHNLAVNDKLNKVWSLFSPTVSFLTEIGLLVIYVFGIYLVSKAHITLGVLTAFLTYSA
RFYGRLDSMSRIVSVTQKSASAAKRIFDILDHVSSVPEPANPVKVGKVEGNITLREVGFR
YGNRAVNRGVNLDIKAGEMIGLVGHSGSGKSTLVNLICRFYDVAEGAILLDGVDIRSFAV
SDYRRNIGLVLQEPFLFFGTIAENIAYGKPNATRAEIMAAARAAHAHDFILRLPQGYDSM
VGERGQGLSGGERQRISIARALLIDPRILILDEATASVDSETEKEIQKALDNLVAGRTTI
AIAHRLSTLQRANRLVVMDRGKVVEEGPHEELMEKQGAYYRLYQAQARNVDTDLDDAPKK
RYDDN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaccttgacgccaggctgcgcttcgtcaagggcttcatcctgctcaccgag
cgccgcattatggcacgggggccaggggagtcgcagtggaaacattgggaataccgcgag
ggcatgaccctcaagctgcacgaccacgcgggcgtgggccatctggagctgttcgacgcc
catggccggctcgattgctggcgcttcacgctgggccagaacctgcacgcgatccgcctc
agcgaacagttcgggccgctgctgcaaagccatctgacaggcaagcccatcgagcgcgaa
gaggaacatgcctgccctacctgcaaggccccgctggagccggaccaggaagaatgcccc
atctgcgccaaagtggagtacacgccgcccacgacctggaccctgttccgcctgtggcgc
ttcgcccatccctaccgctgggccctgctgggcggtttcgtgctgatgctgctctccacc
ggtgcgcacctgattccgccctacctcagcattccgctcacggacaatgtgctggtcccc
taccagaacggccagcccgtggataccggcctggtggtgctgtatatgagcggcctgctc
gcctccgccgtcctggcctggatcctgggctggggcaaaacctatgtgctggcgctggta
tctgagcgcatcggcgccgatctccgcacaaacacctatgaacacctgctgcgcctctcg
ctggagtatttcggcgggaagcgcaccggcgacctgatgtcgcgcatcggcagcgaaagt
gaccgcatctgcgtgtttctctcgctgcacctgctggacttcgcatcggactgcctgctg
atcatcatgaccggggtgatcatgtttacgatcaatccctggctcgctatcgtcacgctt
gtgcccctgcccttcatcgcctggctgatccacctggtgcgcgacaaactgcgcaccggc
ttcgagaagatcgaccgcgtctggggcgaagtcaccaacgtgctggctgacaccatcccc
ggcatccgcgtggtaaaggcctttgcgcaggaagcgcgcgaagcgaaccgcttccgcatc
gcgaacaagcacaacctggccgtgaacgacaagctcaacaaggtatggtcgctgttctcg
ccgaccgtgtccttcctcaccgaaatcggcctgctggtgatttacgtgttcggcatctac
ctcgtgtccaaggcgcacatcaccctgggcgtgctgacagcattcctcacctattccgcc
cgtttctacgggcgcctggattcgatgagccgcatcgtgtcggtcacgcagaagtccgcc
tcggcggccaagcgcatcttcgacatcctggaccacgtgtcgagcgttccggaacccgcc
aacccggtcaaggtgggcaaggtggaaggcaatatcaccctgcgcgaagtgggcttccgc
tacggcaaccgcgccgtcaaccgcggcgtgaacctcgatatcaaggcgggcgagatgatc
ggcctggtgggccacagcggctcgggcaaatcgacgctggtcaacctcatctgccgcttc
tacgacgtggcggaaggcgccatcctgctcgatggcgtcgacatccgctccttcgccgtg
tccgactaccgccgcaacatcggcctggtgctgcaggagcccttcctcttcttcggcacc
attgccgagaacatcgcctacggcaagccgaatgcgacccgcgccgagatcatggcggcg
gcccgcgcggcgcacgcccacgacttcatcctgcgcctgccgcagggctacgactccatg
gtgggcgaacgcggccagggcctctcgggcggcgagcgccagcgcatctcgattgcgcgc
gcgctgctgatcgatccgcgcatcctcatcctggacgaggccacggcatcggtcgactcc
gaaaccgagaaagaaatccagaaggcgctggacaacctggtggcgggccgcaccaccatc
gccatcgcccaccgcctgtccaccctgcagcgcgccaaccgcttggtggtgatggaccgt
ggcaaggtggtggaggaaggcccgcacgaagagctgatggaaaaacagggcgcctactac
cgcctctaccaggcgcaagcgcgcaacgtggataccgacctggacgacgcaccgaagaaa
cgctatgacgacaattaa
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