Massilia endophytica: LSQ66_09075
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Entry
LSQ66_09075 CDS
T09693
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meny03009
]
LSQ66_09075
Ribosome biogenesis [BR:
meny03009
]
Prokaryotic type
ribosomal protein modification factors
LSQ66_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
UGQ48592
LinkDB
All DBs
Position
complement(2011352..2013550)
Genome browser
AA seq
732 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQT
GPEFIIEEVENLDADAQALLTLNPDADTSTYIPGKDLPLEQTIANMSGVLAALGIKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLNCNHFYAGVFWGED
IANAPFVHYPEERWFKPGKNDALPAEILDEYCREVYDPDGELRGSHLVDTNSGNVERGIC
SLPFIRQSDGEVVYFPSNLIENLFVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
ALPDVPQEVLAKYPGIVAGIRGLEEQGFPVLVKDASLGGKYPVMCVTLMNPRTGGVFASF
GAHPSFQVALERSLTELLQGRSFEGLNDLPPPTFVSNAVTEPNNFVEHFIDSSGIVSWRF
FSAKADYDFVEWDFSGHGDNSNADEARTLFGILEDMGKEVYTAEYTHLGATACRILVPGY
SEIYPVEDLVWDNTNKALLFRADILNLHRLDDASLEALLDRLENNELDEYGDIATLIGID
FDENTVWGQLTVLELKLLIQLALQELEAAQELVEAFLQYNDNTVERRLFYQALNAVLEVE
LDEEMELDDYVVSFRRMFGDARMDAVIGSVDGSVRFYGLTPTSMKLEGLDRHQRLLDSYK
KLHAARAKAAAA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaggtcaacttcctcgacaagcttcgcctcgaggccaagttcgatgacttc
acggtggtggccgaccagcccatccgctacaagggcgacggctcggcgcctggtccgttc
gactattttctggcctcatcggccctgtgcgcggcgtatttcgtgaagctgtactgcgac
acgcgcaatatcccgaccgagaacatccgcctgtcacagaacaatatcgttgaccccgaa
aatcgataccagcagatcttcaagatccaggtcgagctgcccgccgatatctctgaaaaa
gaccgccagggcattttgcgctccatcgaccgctgcacggtcaagaaggtggtgcaaacg
ggccccgagttcatcatcgaagaagtggagaacctggatgcggacgcgcaggccctgctg
acgctgaatccggacgccgacacgagtacctatattccgggcaaggacctgccgctggag
cagaccatcgccaatatgtcgggcgttctggcagccctcggcatcaagatcgagatcgca
tcctggcgcaatatcgttccgaacgtgtggtcgctgcatatccgcgacgcgcattcgccc
atgtgcttcaccaacggcaagggggcgaccaaggagagtgcgctggcgtccgcgctgggc
gagtacatcgaacgtttgaactgcaaccacttctacgcaggtgtgttctggggcgaagac
atcgccaatgcgccctttgtgcattatcccgaggagcgctggttcaagcctggcaagaac
gatgcgctgcctgccgaaattctggatgaatactgccgtgaggtctacgaccccgatgga
gagctgcgcggctcgcacctggtcgacaccaattccggcaatgtggaacgcggcatctgc
tcgctgccgttcatccggcagtcggacggggaagtggtgtacttcccgtcaaacctgatc
gagaacctcttcgtcagcaatggcatgagcgccgggaatacgctggccgaggcgcaggtg
caatgcctgtccgagattttcgaaagggcggtgaaacgcgaaatcctggaaggggagatg
gccctgccggacgtgccgcaggaggtgctcgccaagtatccgggcatcgttgcaggcatc
cgcggcctggaagagcagggcttcccggtgctggtgaaggacgcctcgctgggcgggaag
tatccggtgatgtgcgtgaccctgatgaacccgcgcacgggcggcgtgtttgcatccttc
ggggcgcatccgagcttccaggtggccctggagcgcagcctcacggagctgctgcaaggc
cgcagcttcgaaggcctgaacgatctgcctccgccgacctttgtcagcaacgcggtgacc
gagcccaataacttcgtcgaacacttcatcgattcgagcggcatcgtctcctggcgcttc
ttcagcgccaaagcggactacgacttcgtggaatgggatttctccggccacggcgacaac
tccaatgccgacgaagcccgaaccctgttcggcattctcgaagacatggggaaggaggtt
tacacggcggagtacacgcacctaggcgccaccgcctgccgcatcctggtgccgggctat
tcggagatttatcctgttgaagacctggtctgggacaacaccaacaaggcgctcctgttc
cgcgccgatatcctgaacctgcaccgcctggatgacgccagcctggaagcgctgctggac
cggctggagaacaatgagctggacgaatacggtgacattgccaccctgatcggcatcgac
ttcgacgagaatacggtctggggccagctcacggttctggaattgaagctgctcattcaa
ttggcattgcaggaactggaagccgcgcaggaactggtggaagccttcctgcagtacaac
gacaacacggtcgagcgccggctcttctaccaggccctgaatgcggtgctggaggtggag
ctggacgaagagatggaactcgacgactatgtggtcagcttccggcgcatgtttggcgat
gcacggatggacgccgttatcggctcggtggatggcagcgtgcgtttctacggcctgact
ccgaccagcatgaaactggaaggcctcgacaggcatcagcgcctgctcgacagctacaag
aaactgcacgcggcgcgcgccaaggcggccgccgcatag
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