Massilia endophytica: LSQ66_09720
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Entry
LSQ66_09720 CDS
T09693
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_09720
Transporters [BR:
meny02000
]
Other transporters
Pores ion channels [TC:
1
]
LSQ66_09720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UGQ48716
LinkDB
All DBs
Position
2185173..2188151
Genome browser
AA seq
992 aa
AA seq
DB search
MSMYEKKPLAVAVSLALMTLAAQNALAQQAPAADSATQVVEVTGIRASMAKSLSVKKNSS
ANVEVITAEDVGKMPDKNLADSLQRLTGVAVRTDYDEAEKVAMRGTNPDHTLIIFNGHAV
AGGDWYISDQLSSSRSTSLSLMPSNVLNQAIVYKTSQANIQDGGLAGTINVTTRKPLAQK
ERLSGVVNLGGVYADLPGKATHDVNASVNWKNEANTFGIIVQGFAEKRMVRRDSVSRFAY
PPNSGWDVINTATMKGITDESLAGTGLKAADLNGVRIPGSMSMEYVQGERDRKGGMFSAQ
FKPNKDLDMTMTGFHSSMKAPNYGRLNAGAIISMLQGKQSGQGPYAGAPTSVNGKQVFAQ
IKNPVIVTEKTMFGHELRVLKSADIVYPDGTPPQYIGETEGAYRDGALAKSSFLDLDAKY
RVNQDLTIKGLFSTTRGEGKTDLDQGLTYTRFGTGVSYALGGLKDAPMVKYYGTGPNMYK
PQGADGTGFVLTGRNAANARTVDRENSLNLDAEYSLDRGMLKSLESGVRFSEHKRSLVRR
FPQLRYADLAPNAPTSGFIPWPSDFGNGLDGPAGWDNTSWTITPEALKAYYEANRTVTSS
DWERRAGLEIDMRERQSAGYIMANLEADRLSGNIGLRLVRTEVDAMIPYPIPAGICTRSR
PGEPIIPCPGYPDAITWVHEGTGSFQDRTFNPKAGSFFYKKENKHHYTNVLPSLNLRYEL
QDDMITRFGLSRTIGRQNYNLFAVGYSSATCGEAGCTIIGPNPNISPQTSNNADLSWAWY
FAPRSLVSVNLYYSKIKGYPKTGIAGAATIEYIDPRDSQLKTFNVLTSSQQGAHVGGIEL
AYEQPIGKTGFGFTSNVSRAKTKVDDGLPMVGASEWAANLGGYFENDKFSARLVANYRSE
YVNSSTAPTPNAASQGKAVINGVTMPVAPTMAAPVTTLAFNASYNITPTLILSFDATNLT
NAKRAYYRYSEEEQQKLDVSGRQYYLNLKYKF
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtacgagaagaagccgctggccgtagcggtctcgctggcgctgatgacgctg
gcagcgcagaacgcgctggcgcagcaggccccggcggccgattcggccacgcaggtggtg
gaagtgacgggtatccgcgcttccatggcgaagtcgctgagcgtgaagaagaattcctcg
gccaacgtggaggtcatcacggccgaagacgtgggcaagatgccggacaagaacctggcc
gactccctgcagcgcctgaccggcgtggcggtgcgtaccgactacgacgaggccgagaag
gtcgccatgcgcggcaccaatccggaccacaccctgatcatcttcaacggccacgccgtg
gccggcggcgactggtacatttccgaccagctctccagcagccgttccaccagcctttcg
ctgatgccgtcgaacgtgctgaaccaggcgatcgtctacaagacctcgcaggcgaatatc
caggatggcggcctggccggcaccatcaacgtgaccacccgcaagccgctggcgcagaag
gagcgcctgtcgggcgtggtcaacctgggcggcgtgtatgccgacctgccaggcaaggcg
acccacgacgtcaatgcctcggtcaactggaagaacgaagccaacaccttcggtatcatc
gtgcagggcttcgccgagaagcgcatggtgcgccgcgattccgtgtcgcgcttcgcctac
ccgcccaacagcggctgggacgtgatcaacaccgcgaccatgaagggcatcaccgacgaa
tcgctggccggtacgggcctgaaggctgcggacctgaacggcgtgcgtatcccaggttcg
atgagcatggaatacgtgcagggcgagcgtgaccgcaagggcggcatgttctcggcccag
ttcaagccgaacaaagacctcgacatgacgatgacgggcttccactcgtccatgaaggcg
ccgaactacggccgcctgaatgcgggcgccatcatcagcatgctgcagggcaagcagagc
ggccagggcccctacgcgggcgccccgacctcggtcaacggcaagcaggtgttcgcacag
atcaagaacccggtcatcgtgaccgagaagaccatgttcggccacgagctgcgcgtgctc
aagagcgctgacatcgtgtacccggacggcaccccgccgcagtacatcggcgaaaccgaa
ggcgcctatcgcgacggcgcactggccaagagctccttcctcgacctcgacgcgaaatac
cgcgtcaaccaggacctgaccatcaagggcctgttctccaccacgcgcggcgaaggcaag
accgatctggaccagggcctgacctacacccgcttcggcaccggcgtctcctacgcgctg
ggcggcctgaaagacgcgccgatggtcaagtactacggcaccggcccgaacatgtacaag
ccgcaaggcgctgacggcaccggcttcgtgctgaccggccgcaatgccgccaacgcgcgc
accgtggaccgcgaaaacagcctgaacctggatgcggaatacagcctcgaccgcggcatg
ctcaagtcgctggaatccggcgtgcgtttctcggagcacaagcgctccctggtgcgccgc
ttcccgcagctgcgctacgccgacctggcgccgaatgccccgaccagcggcttcattcca
tggccgtcggacttcggcaacggcctggacggcccggcgggctgggacaacaccagctgg
accatcactccggaagcgctgaaggcctactacgaagccaaccgcaccgtcaccagctcc
gactgggaacgccgcgcgggcctggaaatcgacatgcgcgagcgccagagcgccggctac
atcatggccaacctggaagcggaccgcctgtccggcaacatcggcctgcgcctggtgcgc
accgaagtggacgcgatgattccttacccgatcccggccggcatctgcacccgctcgcgt
cccggcgaaccgatcatcccatgccctggctatccggacgcgatcacctgggttcatgag
ggcaccggctccttccaggaccgcaccttcaatccgaaggccggcagcttcttctacaag
aaggagaacaagcaccattacaccaacgtgctgccaagcctgaacctgcgctatgaactg
caggacgacatgatcacccgcttcggcctgagccgcaccatcggccgccagaactacaac
ctgttcgccgtcggctacagcagcgcgacttgcggcgaagccggttgcaccatcatcggc
ccgaacccgaacatctcgccgcagacctcgaacaacgcggacctgtcgtgggcatggtac
ttcgctccacgttcgctggtgagcgtgaacctgtactactcgaagatcaagggctatccg
aagacgggtatcgcaggcgccgcaacgatcgaatacatcgacccgcgcgacagccagctg
aagaccttcaacgtgctgacctcttcgcagcagggcgcgcacgtaggcggcatcgagctg
gcgtatgagcagccgatcggcaaaaccggcttcggcttcacctccaacgtgagccgcgcc
aagaccaaggtcgacgacggcctgccgatggtcggcgcatccgaatgggcggccaacctg
ggcggctacttcgagaacgacaagttctcggcgcgcctggtggcgaactaccgcagcgag
tacgtgaacagcagcaccgctccgactcctaacgcggcaagccagggcaaggcagtgatc
aacggcgtgaccatgccggtcgccccgaccatggccgctcccgtgaccacgttggcgttc
aacgcaagctacaacatcacgccgaccctgatcctgtcgttcgacgcgaccaacctgacc
aacgccaagcgcgcctactatcgctacagcgaagaagagcagcagaagctggacgtcagc
ggccgccagtactacctgaacctgaagtacaagttctaa
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