Massilia endophytica: LSQ66_10725
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Entry
LSQ66_10725 CDS
T09693
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
meny02044
]
LSQ66_10725
02035 Bacterial motility proteins [BR:
meny02035
]
LSQ66_10725
Secretion system [BR:
meny02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LSQ66_10725
Bacterial motility proteins [BR:
meny02035
]
Pilus system
Pilus assembly proteins
LSQ66_10725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
Motif
Other DBs
NCBI-ProteinID:
UGQ48909
LinkDB
All DBs
Position
complement(2411970..2416601)
Genome browser
AA seq
1543 aa
AA seq
DB search
MKTTLSSFLARLFLALALLPVLAHAGVTQIAQVPLLNISGTGTVKPNLMLLFDNSGSMDQ
TFTPDYVDDSLCRTRLTLAANTPTSCKVGYPPFMSPDFNRQYYNPRIRYQPPIKWDGSYY
DEMNSGQTSGWTVVPSDGYGKQNVNLSGAGDTSIDLLTEFPDLQWCDPNNSGDCRVNTAS
YTYPDNTYTSPSAIKTSPYYFSIAVAEYCKDDSLTVCTSVSVGGAAPAGYPVPAKVRWCN
SRALTSCQAKRVGTYIYPRYSTPTSAAIVFGTIAIGASVSTSSMQISDVKIRDGNGNLTL
ISNAAVTAPTGTKTAATQAALANQLAKTIMDKANPLGSAYLACVRNSSLAAVPSCSAFNI
TLPSDNVVAVIPVACVGSKSVATCTTYNDGAQSGSRVGWQLQLTTPDVLTTPATSGKPPT
ALLNLGSGTASSNASGASPKIVNLKFGGTLISASISLGKNKSSTTVAGTIRTAINNANIA
NIRAYVGGDSVTPVCEAEPAYKVCIINSAATTDGAAITWDSVQDKGTLLFTATNAVSMRE
YISATPTALSLGAISSFVRVDLLPGVTYPKATGRTDCVTQTGVCTYEEEMTNFANWYAYY
KSRLQMMKTSVGIAFAALTSDYRVGYVRLSQAGSGLAIDLKPAEFTGTARSTWYDTLYNT
TTSGSTPSRTALDNVGRMFSNLAPYNYAAGQEVVQFPCQQNFVVLTTDGYWNGGSTANVV
NNDNVEKADRFCLASRGCVDTRAQTQPSLADVALHWYNGGSSTGTVSLRPDLEPDVTVPG
QVPAGDGENTHLHMNTYTLGLGMDGVMTYEPNYDTAPKVGGDFYNLITGVKNGCPWNGNG
AYVWPNPDVTNTGNTVQERVDDLWHTAINGHGKYFSANEPREVVDGLSAALANMQVSLGA
ASAAATSTPNISQEDNDIFSDTFTTVRWYGELSKRKINPTDGVVGATAEWTTHDTLGDSV
AASSDTRTIYKYMAGGGSTLDQFRYANMTAQEKGWFDNKCLSLSQCTLLSASDRAIVNNG
NNLVNWLRGQQQYGNDTIFRAYSPSPTNPSIPVVLGDIASSRPAYLRDPRKNYSDNNYAG
WKADRTAERKVATVFTAANDGMLHAFDSATGEELWAYVPRITMSKLYQLASTTYATNHIF
TTDGSPEIGDVYFGGAWHTVLVAGLNGGGRGYYALDVTDPKNPRQLWELCADSTVCSTSV
PNMGLSFGNPQFGTWKDGGGTARWVVFLTSGYNNVPGTDGVNTGDGKGYLFIVDVATGAV
LKTVSTNSGDTATPSGLAKISAITAEPNSDPLVTYIYGGDVLGQMWRFDLTDPNGAVSVV
KMGDAGPLQPITTRPDVTLCKMTDADSGAISAQRVVLFGTGRLLDVPDTTNTDMQSLYLI
KDTGTTIALRGPNMEEQTLVKTSSGNINTYEIKEADADLNTKQGWFIDWKLHAGERMNID
PKIVSGVANVVTNLPTSTSSCSVGGTSNVYGIEVCNGSGVNGTIVGTTLSNTSAAVGFII
IRLPNGQLKMITTTAKGETLTRPITELDSEGAHPTGWRRVKGD
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccacactgtcctccttccttgcccgccttttcctggcgctggcgctactgccc
gtgctggctcatgcgggcgtgacccagatcgcccaggtgccgctgctgaatatcagcggc
accggcacggtcaagcccaacctcatgctgctgttcgataactccggctcgatggaccag
accttcacgccggactacgtggacgattccctgtgccgcacccgcctcacgctggccgcc
aacacccccaccagctgcaaggtgggctacccgcccttcatgagcccggacttcaaccgc
cagtactacaatccgcgcatccgctaccagccgcccatcaaatgggacggcagctattac
gacgagatgaactccggccagacctccggctggactgtggtacccagcgacggctacggc
aagcagaacgtcaacctgtccggcgccggcgataccagtattgacctgctcaccgagttc
cccgacctgcagtggtgcgacccgaacaacagcggcgactgccgcgtgaacacggccagt
tatacctatccggacaacacctacacctcgcccagcgcgatcaagaccagcccctattac
ttcagcatcgccgtcgccgaatactgcaaggacgattcgctgaccgtctgcacttcggtg
tcggtgggcggcgcagcgccggccggctatccggttcccgccaaggtccgctggtgcaac
agccgcgcgctgacgagctgccaggcgaagagggtggggacctatatctatccgcgctac
tcgacgccgaccagcgcggctatcgtgttcggcaccatcgccatcggggcgagcgtttcc
acttcctcgatgcagatcagcgacgtgaaaatccgcgacggcaacggcaacctgaccctc
atcagcaatgccgccgtgaccgcgcccaccggtacgaagacggcggccacccaggcggcc
ctggcgaaccagctggccaagaccatcatggacaaggccaatcccctgggcagcgcctac
ctcgcctgcgtgcgcaattccagcttggccgccgtgccgtcctgctccgccttcaatatc
accctgccgtcggacaatgtggtggccgtgatacccgtggcctgcgtgggctccaaatcg
gtcgccacctgcactacctacaatgacggagcccagagcggctcgcgcgtgggctggcag
ctgcagctcaccacgcccgacgtgctgaccacacctgcgacttcgggcaagccgcccacc
gccttgctcaacctgggcagcggcacggccagctccaatgccagcggcgcttcgcccaag
atcgtcaacctgaagttcggcggcacgctgatctccgcatcgatctcgctgggcaagaac
aagagcagcaccacggttgcgggcaccatccgcaccgccatcaacaacgccaacatcgcc
aatatccgtgcctatgtcggcggcgactcggtgactccggtgtgcgaggcggaaccggcg
tacaaggtctgcatcatcaacagcgccgccaccacggacggcgccgccatcacctgggat
tcggtacaggacaagggcacgctgctcttcaccgccaccaacgccgtgagcatgcgtgaa
tacatcagcgccacgcccaccgcgctctcgctgggcgccatcagctccttcgtgcgcgtg
gacctgctgccgggtgtgacttatcccaaggccacgggccgcacggactgcgtgacgcag
accggcgtctgcacctacgaagaggagatgacgaacttcgccaactggtacgcctactac
aagagccgcctgcagatgatgaagacctcggtcggcatcgccttcgcggccctgaccagc
gactaccgcgttggctatgtgcgcctgtcgcaggcgggttccggcctggccatcgacctg
aaaccggccgagttcacgggcacggcgcgcagcacctggtacgacacgctgtacaacacc
accaccagcggctccacgcccagccgcacggcgctggacaatgtgggccgcatgttctcc
aacctggccccctacaactatgcggcgggccaggaagtggtgcagttcccctgccagcag
aacttcgtggtgctgaccacggacggctactggaacggcggttcgaccgccaacgtggtc
aacaacgacaacgtggagaaggcggaccgcttctgcctcgcgtcccgcggctgcgtcgat
acgcgggcgcaaacccagccctcgctggcggacgtggccctgcactggtacaacggcggc
tcctccaccggcacggtttcgctgcggcccgacctggagccggatgtcacggtgccgggc
caggtccctgctggcgacggcgagaacacccacctgcacatgaacacctacaccctgggc
ctgggcatggacggcgtgatgacctatgagccgaactacgacacggcgcccaaggtgggc
ggcgacttctacaacctgatcacgggcgtgaagaacggctgcccatggaacggcaacggc
gcctatgtgtggcccaatccggacgtcaccaacaccggcaacaccgtgcaggagagggtg
gacgacctgtggcacacggccatcaacggccacgggaagtacttcagcgccaacgagccg
cgcgaggtggtggacggcctgagcgccgccctggcaaacatgcaggtgtccctgggcgcc
gcgtcggccgcagcgacctccacgccgaatatttcgcaggaagacaacgacatcttctcc
gacaccttcaccaccgtgcgctggtacggcgagctttccaagcgcaagatcaacccgacc
gacggcgtggtgggcgccacggctgaatggaccacgcacgatacgctgggcgacagcgtt
gccgccagcagcgatacgcgcaccatctacaagtacatggccggcggcggcagcaccctc
gaccagttccgctacgcgaacatgacggcccaggaaaagggctggttcgacaacaagtgc
ctgtcgctgtcgcaatgcacgctgctgtctgcctcggaccgcgccatcgtcaacaacggc
aacaacctggtgaactggctgcgcggccagcagcagtacgggaacgacaccattttccgc
gcctattcgccgtcgcccaccaatccctcgattcccgtggtgctgggcgatatcgcctcc
tcgcgcccggcctacctgcgcgatccgcgcaagaactacagcgacaacaactacgcgggc
tggaaagccgaccgcacggccgagcgcaaggtggcgaccgtgttcacggcggccaacgac
ggcatgctgcacgccttcgattcggccaccggcgaggagctgtgggcctatgtgccgcgc
attacgatgagcaagctctatcagctggccagcaccacctatgccaccaaccacatcttc
accaccgacggctcgcccgagatcggcgacgtgtatttcggcggcgcctggcacacggtg
ctggtggcaggcctgaacggcggcgggcgcggctactacgccctggatgtcaccgatccc
aagaatccgcgccagctgtgggagctgtgcgccgattccaccgtgtgcagcacgagcgtg
ccgaacatgggcctgtccttcggcaatccgcagttcggcacctggaaggacggcggcggc
acggcgcgctgggtggtcttcctgacctcgggctataacaacgttccgggcacggacggg
gtgaacacgggcgacggcaagggctatctcttcatcgtggatgtggccaccggcgccgtg
ctcaagaccgtcagcaccaattccggcgatacggcgacgccgtccggcctggcgaagatc
agcgccatcacggcggagccgaacagcgacccgctggtgacctatatctacggtggcgac
gtgctgggccagatgtggcgcttcgacctcaccgatcccaatggcgccgtgagcgtggtg
aagatgggcgacgcgggtccgctgcagccaatcaccacccgtccggatgtcaccctgtgc
aagatgacggatgcggacagcggcgccatctcggcgcagcgcgtggtgctgttcggcacc
ggccgcctgctggacgtgccggataccaccaatacggacatgcagagcctctacctcatc
aaggacaccggcacgaccatcgcgctgcgcggcccgaacatggaggagcagaccctggtg
aagacctccagcggcaatatcaacacctacgagatcaaggaagcggacgcggacctgaac
acgaagcagggctggtttatcgactggaagctgcacgccggcgagcgcatgaacatcgat
cccaagatcgtgagcggcgttgccaatgtggtcacgaacctgcccacgtccacttcctcc
tgctccgtgggcggcaccagcaatgtgtatggcatcgaggtatgcaacggcagcggcgta
aacggcaccatcgtcggcaccacgctgtcgaatacctcggcggcggtgggcttcatcatc
atccgcctgcccaacggccagctgaagatgatcaccaccacggccaagggcgaaaccctg
acccgccccatcacggagctcgattcggaaggcgcccaccccacgggctggcgccgcgtg
aaaggggactga
DBGET
integrated database retrieval system
