Massilia endophytica: LSQ66_11390
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Entry
LSQ66_11390 CDS
T09693
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
meny
Massilia endophytica
Pathway
meny00630
Glyoxylate and dicarboxylate metabolism
meny00680
Methane metabolism
meny01100
Metabolic pathways
meny01120
Microbial metabolism in diverse environments
meny01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LSQ66_11390 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LSQ66_11390 (fdhF)
Enzymes [BR:
meny01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LSQ66_11390 (fdhF)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer2
Fer4_7
Fer4_Nqo3
Fer4_9
Fer4_21
Fer4
Fer4_10
Fer4_8
Fer4_17
Fer4_6
Fer4_16
Fer4_2
Fer4_22
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
UGQ49034
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Position
complement(2549001..2551778)
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AA seq
925 aa
AA seq
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MSVRFELNGRSVEAAPGETVLQAARREGVEIPHLCYKDGVDVAGNCRACMVEIDGERVLA
PSCCRYPAEGMKVATDSPRALSAQKMVLELLLSDMPETDYTRHNEVDEWAAKLEVGKPRF
APRTQPQADLSHAAIAVNLDACIQCTRCVRACRDEQANDVIGLAFRGDRASIVFDMADPM
GASTCVACGECVQACPTGALMPARGAALPVPEKRVDSVCPYCGVGCQLTYNVSNNRIQYV
EGRDGPANHGRLCVKGRYGFDYAHHPQRLTKPLIRRADAPKSGDFTMDPERVSDVFREAT
WEEALALAGGKLAQLRDTHGRGALAGFGSAKGSNEEAYLFQKLVRTGFGSNNVDHCTRLC
HASSVAALLEGIGSGAVSNPVMDVMQAEVVLVIGANPTVNHPVAATWIKNAVRQGTQLIV
CDPRRSELARHAHRYLQFKPDTDVALLNAMMHVIVHEGLVDEDFIASRTIGYEELRANVE
GYSPELMAPVCGIDADTIRYVARLYAKSKGSMILWGMGISQHVHGTDNARCLIALALMTG
QIGRPGTGLHPLRGQNNVQGASDAGLIPMMYPDYQRVSEPAVRQRFAQAWKVPPESLDER
PGLTVVEVMDAIIAGKVRGMYIMGENPAMSDPDASHAREALAALDHLVVQDIFLTETAYL
ADVVLPASAFPEKTGSFTNTDRTVQIGRQALDPPGDARQDLWIIQQIAQRVGLDWRYGHV
SEVFEEMRQLMPSIAGISWQRLEHKHAVTYPCPAEDQPGTPVVFTETFPRESGKARFVPA
DIIPADERPDAEYPMVLITGRQLEHWHTGSMTRRAAVLDAIEPDPVALVHPLDLDKLGVA
AGGVITIASRRGEVALYARADDSSPPGAVFVPFCYYEAAVNKLTNPALDPFGKIPEFKYC
AVRVTPGGEVAEQGSYGGGQLLQPI
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtacgcttcgaactgaatggccgcagcgtggaggcggcgcctggcgagaccgtg
ttacaggccgcgcgccgcgagggcgtggagattccccatctctgctacaaggacggcgtg
gacgtggctggaaattgccgcgcgtgcatggtggagatcgacggcgagcgggtgctggcg
ccgtcctgctgccgctacccggccgaaggcatgaaagtggcgacggacagcccgcgcgcg
ctcagcgcgcagaaaatggtgctggagctgctgctctccgacatgccggaaacggactac
acccgccataacgaggtggacgaatgggctgcgaagctggaggtgggcaagccccgcttc
gcgccacgcacccagccgcaggccgacctgtcgcacgccgcgatcgccgtgaacctggac
gcctgcatccagtgcacgcgctgcgtcagggcctgccgcgacgagcaggcgaacgatgtg
atcggcctggccttccgtggcgaccgcgccagcatcgtcttcgacatggccgacccgatg
ggcgcctccacctgcgtggcctgcggcgaatgcgtgcaggcctgcccgaccggagcgctg
atgcccgcgcgcggcgccgcgctgccagtgccggaaaagcgcgtggattcggtctgtccc
tattgcggcgtgggctgccagctcacctacaacgtcagcaacaaccgcatccagtatgtg
gagggacgcgacggcccggccaaccatggacgcctgtgcgtcaaaggacgctacggtttc
gattatgcccaccacccccagcgcctgaccaagccgcttatccgccgtgcggacgctcca
aagtccggcgacttcaccatggatccggagcgcgtgtccgacgtcttccgcgaggcgaca
tgggaagaggcgctggcgctggcgggcggcaaactggcgcagctgcgcgatacccacggg
cggggcgcgctggcgggcttcggctccgccaagggcagcaacgaggaagcctatctgttc
cagaagctggtgcgcacaggcttcggcagcaataacgtcgatcactgcacgcggctgtgc
catgcctcgtccgtggcggcgctgctggaagggataggctcgggcgccgtgtcgaatccc
gtgatggacgtgatgcaggccgaggtggtgctggtcatcggcgccaatcccacggtgaac
catcccgtggcggcgacctggatcaagaacgccgtgcggcaggggacgcagctcatcgtc
tgcgatccgcgccgttcggaactggcgcgccatgcgcaccgctatctccagttcaagccg
gataccgacgtggcgctgctcaacgccatgatgcatgtgatcgtgcacgagggcctggtg
gatgaagactttattgcgagccgcaccatcggctacgaggagctgcgcgccaatgtggag
ggctacagccccgaactcatggcgccggtctgcggcatcgatgccgataccatccgctat
gtggcgcggctgtacgcgaagtcgaaaggatcgatgatcctgtggggtatgggcatttcg
cagcacgtgcacggcaccgacaacgcgcgctgcctgatcgccctggcgctcatgacgggc
cagatcgggcgccccggcaccggcctgcacccgctgcgcggccagaacaatgtgcagggc
gcttccgatgcaggcctgattccgatgatgtatccggactatcagcgtgtgagcgagcct
gcggtgcgccagcgcttcgcgcaggcctggaaggtgccgccagagtctctcgacgagcgg
cccggcctcaccgtggtggaagtgatggacgccatcatcgcgggcaaggtgcgcggcatg
tacatcatgggcgagaaccccgccatgtccgatcccgacgcgagccatgcgcgcgaggcg
ctggccgcgctggaccatctcgtcgtgcaggacatcttcctcaccgagaccgcctatctg
gcggacgtggtgctgccagccagcgccttccctgaaaagaccggcagcttcaccaatacc
gaccgcacggtgcagatcggccgccaggccctcgacccgcccggcgatgcgcggcaggac
ctgtggatcatccagcagatcgcccagcgcgtggggctggactggcggtacggtcatgta
tccgaggtgttcgaggagatgcgccagctcatgccgagcattgcgggcatcagctggcag
cgcctggaacacaagcacgcagtgacgtatccctgcccggcggaggaccagcccggaacg
ccggtcgtgttcaccgagaccttcccgcgcgagtccggcaaggcgcgctttgtaccggcc
gatatcattccggccgacgaacggccggatgccgaatacccgatggtgctgatcaccggg
cgccagctggagcattggcacaccggcagcatgacccgccgcgccgccgtgctggacgcc
atcgagcccgatccggtcgcgctggtgcacccgctggacctcgacaagctcggcgtggcg
gcgggcggcgtgatcaccatcgcttcgcgccgtggagaggttgccttgtatgcgagggcg
gacgacagctccccgccgggcgccgtcttcgtgccgttctgctattacgaggcggccgtg
aacaagctgaccaacccggcgctcgaccccttcggcaagatccccgagttcaagtactgc
gcggtgcgcgtcacgcctggcggcgaggtcgcggagcagggcagctacggtggaggacaa
ctgctgcagcccatttga
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