Massilia endophytica: LSQ66_12270
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Entry
LSQ66_12270 CDS
T09693
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
meny
Massilia endophytica
Pathway
meny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LSQ66_12270 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_12270 (recO)
DNA repair and recombination proteins [BR:
meny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LSQ66_12270 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LSQ66_12270 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
UGQ44583
LinkDB
All DBs
Position
complement(2743326..2744153)
Genome browser
AA seq
275 aa
AA seq
DB search
MSSAVTAEAVSTLGSDPNDGYGHPAGSAVRKRTAPRTVGIRVSGQPAFVLHSYPYKETSL
IVELLTRDFGRVALIAKGAKRPHSQLRGVLQTFQPLSVSWTGKNELRTLTDADWVGGMLP
LEKTALLCGFYLNELMVKLLARDDAHPALFDHYVSTLNQLAHAEPAPIVLRKFETALLKE
TGVAADLTRCTATRTKVLVDVQYVVEPERGPRPERDDDDFVPRVSGKTLLDMEREDYQDA
ITQAQSKQLMRFLLAHHLGGAPLNTRQILIDLMQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgctgtgactgccgaggccgtgtccacgttggggtcagaccccaatgacggg
tacggccatccggcgggctcggctgtacgcaagcggacagcgccgcgcacggtcggcatc
cgcgtcagcggccagccagcctttgtcctgcatagctatccctacaaggaaacgagcctg
atcgtcgagctgctgacgcgcgacttcgggcgggtagcactgatcgccaagggcgcgaag
cgtccccattcccagctgcgcggcgtgctgcaaaccttccagcccctgtccgtgagctgg
accggcaagaacgagctgcgcaccctcacggatgccgactgggtcggcggcatgctcccc
cttgaaaagacggccctcctgtgcggcttctacctcaatgagctgatggtgaagctgctg
gcgcgagacgacgcccaccccgccttgttcgatcactatgtatcgaccctgaaccagctg
gcgcacgcggaaccggcgcccatcgtcttgcgcaagttcgaaacggccttacttaaggag
actggcgttgcggcagatctcacccgctgcaccgccacgcgcacgaaagtgctggtcgat
gtacagtatgtggtggagccggagcgcggcccccgtcccgaacgcgacgacgacgatttc
gtccctcgcgtatcgggcaagacgctgctggacatggaacgcgaggattatcaggacgcc
atcacgcaagcccaatccaagcagctgatgcgcttcctgctcgcgcaccacctcggcggc
gcgcccttgaacacgcgccagattctgatcgacctgatgcaactctaa
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