KEGG   Massilia endophytica: LSQ66_12280
Entry
LSQ66_12280       CDS       T09693                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
meny  Massilia endophytica
Pathway
meny03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:meny00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LSQ66_12280 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meny03019]
    LSQ66_12280 (rnc)
   03009 Ribosome biogenesis [BR:meny03009]
    LSQ66_12280 (rnc)
   03036 Chromosome and associated proteins [BR:meny03036]
    LSQ66_12280 (rnc)
Enzymes [BR:meny01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LSQ66_12280 (rnc)
Messenger RNA biogenesis [BR:meny03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LSQ66_12280 (rnc)
Ribosome biogenesis [BR:meny03009]
 Eukaryotic type
  90S particles
   RNase
    LSQ66_12280 (rnc)
 Prokaryotic type
  rRNA processing factors
   LSQ66_12280 (rnc)
Chromosome and associated proteins [BR:meny03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LSQ66_12280 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: UGQ44585
LinkDB
Position
complement(2745073..2745861)
AA seq 262 aa
MNLQLLQTRLGHTFQDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERYNAI
DEGDLSRLRANLVKQQSLYEIAQKLELSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDSGFDAAAKVIRAFYIPILDTVDPRTLGKDAKTLLQEFLQSKKISLPLYNVVATHGAA
HSQEFEIECLVPKLGIQVYGRGGSRRAGEQAAAKLALEVAEQALQKTPAAARKARPRAAQ
LKLAGIATVQSDEPADSKAATK
NT seq 789 nt   +upstreamnt  +downstreamnt
atgaatttacagttattgcagactcggctaggccacacgttccaggatgctggtttgtta
cagcaggccctgacgcaccgcagccatagcagcctgcataacgaacgcctcgaattcctc
ggcgactccatcctcaactgcgtagtggcctccatcctttacgagcgctacaacgccatc
gacgaaggcgacctgtcgcgcttgcgcgccaacctggtcaagcagcagtccctgtacgaa
atcgcccagaagctggagctctcgcagttcctgcgcctgggcgagggcgagctgaagtcg
ggcggcttccgccgtccctccatcctcgccgataccctggaagccctgctgggcgccatc
ttcctcgactcaggcttcgatgccgcggccaaggtgattcgcgcgttctacattccgatc
ctggacacggtggacccgcgcaccctgggcaaggacgccaaaaccctgctgcaggaattc
ctgcagtcgaagaagatctccctgccgctgtacaacgtggtggccacccatggcgccgcg
cacagccaggagttcgagatcgaatgcctggtgcccaagctgggcatccaggtctacggc
cggggcggcagccgccgcgcgggcgaacaggccgccgccaagctggccctggaagtggcc
gagcaggccctgcaaaaaacgccggctgcggcgcgcaaggcgcgtccccgggctgcgcaa
ctgaaactggcaggcatcgccaccgtccagagcgacgaaccggcggacagcaaagccgcc
accaaataa

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