Massilia endophytica: LSQ66_12420
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Entry
LSQ66_12420 CDS
T09693
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
meny03110
]
LSQ66_12420 (clpB)
Chaperones and folding catalysts [BR:
meny03110
]
Heat shock proteins
HSP100
LSQ66_12420 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_24
nSTAND3
AAA_14
bpMoxR
IstB_IS21
Mg_chelatase
AAA_7
NBD_SMAX1
ABC_tran
AAA_25
ATPase_2
DUF815
AAA_19
NACHT
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
UGQ44613
LinkDB
All DBs
Position
complement(2769139..2771745)
Genome browser
AA seq
868 aa
AA seq
DB search
MRQDKLTTKLQEAIADAQSLAVGSDNPYIEPIHLLMALMNQEDGGARSLLQRAGVNIGGL
MNALKAGLERLPKVSGTGGNVQVSREFVSMLNLADKESQKRNDQFVSSEMVLLALTDDKS
DAGRLARENGLSRKSLEAAIDTVRGGNKVDSAEAEGQREALKKYTLDLTERARMGKLDPV
IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNNEVPDSLRGKRVLSL
DMAALLAGAKFRGEFEERLKAVLHELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCLGATTLDEYRKYIEKDAALERRFQKILVDEPSVEATIAILRGLQDKYELH
HKVEITDPAIIAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLERRLI
QLKIEKEAVKKEKDEASRRRLDLIDEEIAKLQREYNDYEEVLKAEKANVQGTTHIKEEIE
RIKQQMEEATRASNWQRVSELQYGKLPELEAQLKQAETAGGEAEDKPRLLRTQVGAEEIA
EVVSRATGIPVSRMMQGERDKLLHIEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRP
YGSFMFLGPTGVGKTELTKALAAFLFDTEDSLIRIDMSEFMEKHSVARLIGAPPGYVGYD
EGGYLTEAVRRKPYSVILLDEVEKAHHDVFNVLLQVLDDGRMTDGQGRTVDFKNTVVIMT
SNLGSHKIQSMDESDPAVVKLAVMAEVRSHFRPEFINRIDEIVVFHGLDDKNIGSIAKIQ
LKILEERLKRMDMGLEVSDAALQKIAEAGYDPVYGARPLKRAIQQQIENPLSKLILEGRF
GPKDVIRIDARNGSLVFSADGKEEVVHM
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagataaactgactacaaaactacaggaagcgattgccgacgcccagagcctg
gcggtcggaagcgataacccctatatcgagcccatccatctgctgatggcgctcatgaac
caggaggacggcggcgcccgctccctcctgcagcgcgccggtgtgaacatcggcggcctg
atgaacgccctgaaagcaggcctggagcgcctgcccaaggtgtcgggcacgggcggcaat
gtgcaggtgagccgcgagttcgtgtccatgctcaacctggcggacaaggaatcccagaag
cgcaacgaccagttcgtatccagcgaaatggtgctgctcgccctgacggacgacaaatcc
gacgcgggccgcctggcgcgggagaacggcctgagccgcaagtccctggaagcggccatc
gataccgtccggggcggcaacaaggtcgattcggccgaggcggaagggcagcgcgaggcg
ctcaagaaatacaccctggacctgaccgagcgcgcccgcatgggcaagctggaccccgtg
atcggccgcgacgacgagatccgccgcgccatccaggtgctccagcgccgcaccaagaac
aatcccgtgctgatcggcgagccgggcgtgggcaagacggccatcgtggaaggcctggcc
cagcgcatcgtgaacaacgaggtgcccgattccctgcgcggcaagcgcgtgctctcgctc
gacatggcggccctgctggcaggcgccaagttccgcggcgagttcgaggaacgcctgaag
gccgtgctgcacgagctggcgaaggacgaaggccagaccatcgtcttcatcgacgagctg
cacaccatggtgggcgcgggcaaggccgaaggcgccatggacgcgggcaatatgctcaag
cctgcgctggcgcgcggcgagctgcactgcctgggcgcgaccacgctggacgaataccgc
aaatacatcgagaaggacgccgcgctggagcgccgcttccagaagatcctggtggacgag
ccgagcgtggaggcgaccatcgccatcctgcgcgggctgcaggacaagtacgagctgcac
cacaaggtggagatcaccgaccccgccattatcgcggcggccgagctctcgcaccgctac
atcaccgaccgcttcctgcccgacaaggccatcgacctgatcgacgaagcggcttcgaag
atcaagatcgagatcgactccaagccggaggtgatggacaagctcgaacgccgcctgatc
cagctgaagatcgagaaggaagccgtcaagaaggagaaggacgaggcctcgcgccgccgc
ctggacctgatcgacgaggagatcgcgaagctccagcgcgagtacaacgattatgaggag
gtgctgaaggccgaaaaggccaatgtacagggcaccacgcatatcaaggaagagatcgag
cgcatcaagcagcagatggaggaagcgacgcgcgcctccaactggcagcgcgtgtccgaa
ctccagtacggcaagctgccggagctggaggcccagctgaagcaggccgaaacggcaggc
ggtgaggccgaggacaagccgcgcctgctgcgcacccaggtgggtgcggaggagatcgcg
gaagtggtctcgcgtgccaccggcattcccgtctcgcgcatgatgcagggcgaacgcgac
aagctgctgcacatcgaggagaagctgcacgaacgcgtggtggggcaggacgaggcgatc
aacgccgtggccgacgccatccgccggtcgcgcgcgggcctggccgatccgaaccgccca
tacggctccttcatgttcctcggcccgacgggcgtgggcaagacggagctcaccaaggcg
ctggcggccttcctcttcgacacggaggattcgctgatccgcatcgacatgagcgaattc
atggagaagcattcggtggcccgcctgatcggcgcgccgccgggctacgtgggctacgac
gaaggtggctacctgacggaggccgtgcgccgcaagccttacagcgtgatcctgctcgac
gaggtggagaaggcccaccacgacgtgttcaacgtgctgctgcaggtgctggacgacggc
cgcatgaccgatggccagggccgcaccgtggacttcaagaacactgtggtgatcatgacc
tccaatcttggctctcacaagatccagtcgatggacgaaagcgatccggccgtggtgaag
ctggccgtgatggcggaggtgcgttcccacttccggccggagttcatcaaccgcatcgac
gagatcgttgtcttccacggcctggacgacaagaatatcggttcgattgcgaagatccag
ctcaagatcctggaagagcgcctgaagcgcatggacatgggcctggaagtgagcgacgcc
gcgctgcagaagatcgccgaagcgggctacgacccggtgtatggcgcccgtccgctgaag
cgcgcgatccagcagcagatcgagaacccgctgtcgaagctgatcctcgaaggccgcttc
gggccgaaggacgtgatccgcatcgacgcccgcaacggctcgctggtcttcagcgcggac
ggcaaggaagaagtcgtccacatgtaa
DBGET
integrated database retrieval system
