Massilia endophytica: LSQ66_12455
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Entry
LSQ66_12455 CDS
T09693
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_12455
DNA repair and recombination proteins [BR:
meny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSQ66_12455
Archaeal homologous recombinant proteins
LSQ66_12455
BRITE hierarchy
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UGQ44620
LinkDB
All DBs
Position
2780611..2781846
Genome browser
AA seq
411 aa
AA seq
DB search
MRLLHTSDWHLGQSLHNFDRHYEHQRFLDWLLDLIVSERADALLLAGDVFDNANPSAVSQ
RQFYRFLQQARERAPQLDLVIIAGNHDSPGRLEAPLPLLEAHGARVVGNVTRKEDGSIDV
GGMVLPLRNGDGKVAAWCIAIPFLRPGDVPRVEAGEGEEAPDPYLAGIAELYRLALEHAL
SLRKDGQAIVAMGHCHLVEGQMSADSERRIVIGGTEMLPSGIFGPEIAYTALGHLHLAQG
KQEHIRYCGSPIPLSFSETQYKHQVLCVELEGAALSAVRPVFVPRSVPLLRVPASPAPLE
AVLAELSALELPECETHAQPYLEVRVRLDAPEPGLRARIEAAIEGKPLRLAKIETSSSAR
GQSLEDAAVSLDQLARLQPDEVFKRLYRQKYDSEAPEEQLQAFAELLLARE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttctgcacacctcggactggcacctcggccagtcgctccacaatttcgaccgc
cactacgagcaccagcgcttcctggactggctgctcgacctgatcgtgagcgagcgcgcc
gacgccctgctgctggcgggcgatgtgttcgacaacgccaatccctcggccgtgtcgcag
cgccagttctaccgcttcctgcagcaggcccgcgagcgcgcgccgcagcttgacctcgtg
atcatcgcgggcaaccacgactcgcccggccgcctggaggcgcccttgccgctgctggaa
gcgcacggcgcccgcgttgtcggcaatgtcacgcgcaaggaggacgggagcatcgacgtg
ggcggcatggtgctgccgctgaggaatggcgacggcaaggtggccgcatggtgcatcgcc
attcccttcctccggccgggcgacgttccacgcgtggaagcgggcgaaggcgaagaagcg
ccggatccgtacctggccgggatcgcggagctgtaccggctcgcgctggagcacgcgctg
tccctgcgcaaggacgggcaggccatcgtagccatgggccactgccacctggtggaaggc
cagatgtcggcggattcggaacgccgcatcgtcatcggcggcaccgaaatgctgccctcg
gggatcttcgggccggaaattgcctatacggcgctcggccacctgcatctcgcgcagggc
aagcaggaacatatccgctactgcggcagtccgatccccctctccttctcggaaacccag
tacaagcatcaggtgctgtgcgtggaactggaaggtgcggcgctgagcgctgtccgtcct
gttttcgtgcctcgcagcgttcccttgctgcgggtgcctgcgtcgcccgctccgctggag
gccgtactggccgagctctcggcgctggagctgcccgaatgcgaaacccatgcgcagccc
tatctcgaagtaagggtaaggctggatgcgcccgaaccgggcctgcgcgcgcggatcgag
gccgccatcgaaggtaagccgcttcgcctggcaaagatcgaaacgtccagcagcgcgcgc
ggccagtccctcgaagatgcggccgtgtcactcgaccagttggcccggctccagccggac
gaggtgttcaagcgcctctaccgccagaaatacgacagcgaagctcccgaggaacaattg
caggcctttgccgaactgctcctggcgcgggaatga
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