Massilia endophytica: LSQ66_12935
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Entry
LSQ66_12935 CDS
T09693
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
meny
Massilia endophytica
Pathway
meny00300
Lysine biosynthesis
meny01100
Metabolic pathways
meny01120
Microbial metabolism in diverse environments
meny01230
Biosynthesis of amino acids
Module
meny_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LSQ66_12935 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
meny01002
]
LSQ66_12935 (dapE)
Enzymes [BR:
meny01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LSQ66_12935 (dapE)
Peptidases and inhibitors [BR:
meny01002
]
Metallo peptidases
Family M20
LSQ66_12935 (dapE)
BRITE hierarchy
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UGQ44709
LinkDB
All DBs
Position
2871614..2872747
Genome browser
AA seq
377 aa
AA seq
DB search
MTASRTLALTEKLIGLSSVTPEDKGCQDQLIHLLEPLGFQCETIQSGEVTNLWARKGTEQ
PLLVFAGHTDVVPTGPVEQWASEPFYPTHRDGKLYGRGTADMKTSIAAMVVACEEFIAAH
PDHKGSIAFLITSDEEGPATDGTVVVCNKLKERGVKLDYCIVGEPTSSQTLGDMIKNGRR
GSLSGCLTVKGVQGHIAYPQLAKNPIHLAAPAMADLVAEVWDEGNEYYLPTSWQMSNIKA
GTGANNVIPGEMVIDFNFRFSTASTADSLKERVHAILDRHGLEYDLKWTLSGLPFLTPRG
TLSTAICEAIKDETGVDTELSTTGGTSDGRFIAQICPQVIEFGPPNGSIHKIDEHIEVRF
IDPLKNIYRRTLENLLR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcccgtaccctcgcgctgaccgaaaaactgatcggcctttcctccgtcacc
cctgaagacaaaggctgccaggaccagctgatccacctgctggagccgctgggcttccag
tgcgagaccatccagtccggcgaggtcacgaacctgtgggcgcgcaagggcacggaacag
ccgctgctggtcttcgccggccacaccgacgtggtgcccaccggcccagtcgagcagtgg
gcgtcggaacccttctaccccacccaccgcgacggcaagctgtatgggcgcggcacggcg
gacatgaagacctccatcgccgccatggtcgtggcctgcgaagagttcatcgccgcgcat
ccggaccacaagggctccatcgccttcctcatcacgagcgacgaggaaggcccggccacg
gacggcacggtcgtcgtatgcaacaagctgaaggaacggggcgtaaagctggattactgc
atcgtgggcgaacccacctccagccagaccctgggcgacatgatcaagaacggccgccgc
ggctcgctctccggctgccttaccgtcaagggcgtgcagggccatatcgcctacccccag
ctggcgaagaatcccatccacctcgccgcccctgccatggccgacctggtggccgaagtc
tgggacgaagggaacgaatactacctgcccacttcctggcagatgtccaacatcaaggca
ggcaccggcgcgaacaacgtcattccgggcgagatggtcatcgacttcaacttccgcttc
tccaccgccagcacggcggacagcctgaaggagcgcgtgcacgcgatcctggaccgccac
ggcctcgaatacgacctgaagtggacgctgagcggcctgcccttcctcacgccgcgcggc
accctgtccaccgccatctgtgaagcgatcaaggatgaaacgggcgtggacaccgagctc
tccaccaccggcggcacctcggacgggcggtttatcgcccagatctgccctcaggtgata
gaattcggcccgcccaacggcagcatccacaagatcgacgagcacatcgaagtgcgcttc
atcgacccgctgaaaaacatctaccgccgcacgctggaaaacctgctgcgctga
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