Massilia endophytica: LSQ66_13895
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Entry
LSQ66_13895 CDS
T09693
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
meny
Massilia endophytica
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meny03021
]
LSQ66_13895 (rpoS)
Transcription machinery [BR:
meny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LSQ66_13895 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UGQ44891
LinkDB
All DBs
Position
complement(3071878..3072888)
Genome browser
AA seq
336 aa
AA seq
DB search
MTRSPHNHLEDDSVPEDYPDEPIDDGAEAGEIDGPTAVEASTTVIESVDELKKVLAAELS
TDTTQHYLNQIGAKPLLTAEQEVHYATLAKQGDFAARQKMIEHNLRLVVSIAKHYINRGV
VLLDMIEEGNIGLMRAIDKFEPERGFRFSTYATWWIRQSIERAIMNQARTVRLPVHMVRE
LNQILRGKYHLEAQHHNGKDATAEDIADLVGRPVEEVQDILALSEHATSLDAPLDNDPQS
SLMDMLPGDSEDSPDARAEHHEMRVLVRDWLTKLPDKQRIVIMRRFGLDNDDPATLETLA
EEMGVTRERVRQIQQEALVKLKRAMAARGVVRDSLL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacacgctcgccgcataaccacctggaagacgactcggttccggaggattacccggac
gagccaatcgacgatggggccgaggcgggcgagatcgacggtcccaccgccgtcgaggcc
agcactaccgtcatcgagagtgtcgacgagctgaaaaaggtgctggcggcggagctctcc
accgacaccacccagcactacctcaaccagatcggcgccaagcccctgctgacggcggaa
caggaagtccattacgcgaccctggccaagcagggcgactttgcggcccggcagaagatg
atcgagcacaatctgcggctcgtggtctccatcgccaagcactacatcaaccggggcgtg
gtcctgctcgacatgatcgaggagggcaatatcggcctgatgcgcgccatcgacaagttc
gagcccgagcgcggcttccgcttttccacttatgcgacctggtggatccgccagagcatc
gagcgcgcgatcatgaaccaggcgcgcacggtgcggctgccggtgcacatggtgcgcgag
ctgaaccagatcctgcgcggcaaataccatctcgaagcccagcaccacaacggcaaggac
gccaccgccgaggacatcgccgacctggtgggacgtccggtggaggaggtgcaggacatc
cttgcgctctccgagcacgccacatcgctcgatgcgccgctggacaacgacccgcagtcc
tcgctgatggacatgctgcccggcgacagcgaagacagccccgatgcgcgggccgagcac
catgaaatgcgggtgctggtgcgcgactggctcaccaagctgccggacaagcagcgcatc
gtcatcatgcgccgcttcggcctcgacaacgacgaccccgcgacgctggagaccctggcc
gaggagatgggcgtcacgcgcgagcgcgtccgccagatccagcaggaagcgctcgtaaag
ctcaaacgcgccatggccgcccgcggcgtcgtccgcgactccctgctgtag
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