Massilia endophytica: LSQ66_14435
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Entry
LSQ66_14435 CDS
T09693
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
meny
Massilia endophytica
Pathway
meny02020
Two-component system
meny02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LSQ66_14435
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LSQ66_14435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
meny02022
]
LSQ66_14435
Two-component system [BR:
meny02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
LSQ66_14435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA
AAA_16
HTH_8
AAA_2
FleQ
TIP49
Motif
Other DBs
NCBI-ProteinID:
UGQ49254
LinkDB
All DBs
Position
3161370..3162749
Genome browser
AA seq
459 aa
AA seq
DB search
MANGAHLLLVDDDADLLRLLSMRLTANGYRVTAVDSAEAALARMSIELPAMVISDIRLPE
RDGMALFQQIRSEYPALPVILLTAHGTIPDAVEATTLGAYAYLTKPFDAKVLLERIEQAL
SMTAPSASHTSRDDEWRAEIISRSQSMAELLAEARLVAASDASVLIRGESGTGKELLARA
IHRASRRAKAPFIAVNCGAIPEQLLESELFGHVKGAFTGAVASREGLVQAADGGTLFLDE
IGDMPLLLQVKLLRVLQERVVRQLGSDNGRPVDVRVLSATHRDLDAAMLEGQFREDLYYR
LNVITLTLPPLSQRREDIGLLATQFLQSLAAKYQKTVNGFAPDALEALTRASWPGNVRQL
YNVVEHVCALATAPLVPLSLVQRALRVPSLEVLSYTEAKQRFERNYLVQLLKLTDGNVAD
AARLAERNRTEFYRLLQKYDLNASQFRGDGPPVAEERQE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggcgcccatctcctcctggtcgacgacgatgccgacctgctgcgcctgctc
tccatgcggctcaccgccaacggctaccgcgtgacggccgtggacagcgcggaggcggcc
ctcgcccgcatgtccatcgaactgcctgccatggtcatcagcgatatccgcctgcccgaa
cgcgacggcatggccctgttccagcagatccgcagcgaataccctgccctgcccgtgatc
ctgctgaccgcgcacggcaccattcccgatgcggtggaggccacgacgcttggcgcctac
gcctacctcaccaagcctttcgatgcgaaggtgctgctggaacgcatcgagcaggccctc
agcatgacggcgcccagcgcatcgcacacctcgcgggacgacgaatggcgcgcggagatc
atcagccgcagccagtccatggcggagctgctggcggaggcccgcctcgtcgcggcatcg
gatgcgagcgtgctgatacgcggagagagcggcacgggcaaggagctgctggcccgcgcc
atccaccgcgccagccgccgcgccaaggcgcccttcatcgccgtcaactgcggggcgata
ccggaacagctgctggagtcggaactgttcggccatgtgaaaggcgccttcacgggcgcc
gtggcgagccgcgaaggcctggtgcaggcggcggatgggggcacgctcttcctcgacgaa
atcggcgacatgcccttgctgctgcaggtgaagctgctgcgtgtactgcaggagcgcgtg
gtgcgccagctgggatcggacaacggccgcccggtcgacgtgcgcgtgctctccgccacc
caccgcgacctggacgcggccatgctggaaggccagttccgcgaagacctttactaccgc
ctgaacgtcatcacgctcaccttgccgcccctgtcgcagcggcgcgaggatatcggcctg
ctggccacgcagttcctgcaatccctggcggcgaaataccagaagaccgtgaacggtttc
gcgccggacgcgctggaagcgctgacgcgcgcctcgtggccgggcaacgtgcgccagctc
tacaacgttgtggaacatgtatgcgcgctggccacggcgcccctggtgccgctctcgctg
gtccagcgcgccttgcgggtgccctcgctggaagtgctcagctatacggaagcgaagcag
cgcttcgagcgcaactatctcgtgcagctgctcaagctgacggatggcaatgtcgccgac
gcggcccggctcgccgagcgtaaccgcacggagttctaccgcctgctccagaaatacgac
ctcaacgccagccagttcaggggggacggtccacctgtcgccgaggagcgacaagaatag
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