Massilia endophytica: LSQ66_14500
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Entry
LSQ66_14500 CDS
T09693
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
meny
Massilia endophytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Extensin_1
Serglycin
Motif
Other DBs
NCBI-ProteinID:
UGQ45006
LinkDB
All DBs
Position
complement(3174044..3179227)
Genome browser
AA seq
1727 aa
AA seq
DB search
MTHLDQHQRAPQGGYQLQRKLLAATIAACFGVAQANPTLPQVVAGQATFSQQGNVFSITN
TPNTIINWQSFSVQRDEITRFIQQSSDSKVLNRITGQDPSQILGSLQSNGQVFLINPNGI
MFGKDARIDVNGLVASSLQLSNADFLAGKNNFNAEGHAGKVVNQGQITTPQGGKVFLIAP
TVENHGVITAPNGEVLLAAGKSVQLVDSSNPAIQVVVSAPEDQALNLGQIVAQGGRVGIY
GALVNQRGIVNADSAVRGENGKIILKASRTVLADAGSRTTATGAGKGGDIQILGEKVGLN
GDAVVDASGQQGGGSVLLGGDYQGKNAAVQNAKQTFVGKNAVVKADALASGDGGKVIVWG
DESAQAYGAISARSANGKGGFVETSGHYLDVAGLRVDTTGKDTNGVWLLDPYNIEIVSSS
GGYGLADMADFNGGAGGTATSSINASDINGAGTNVVLLAKNDINVNAAVNITTANVGLTA
QAGNNINVNQAITTNGGAVTLSAGDIASGTANAAGTVYVNQGITTAGGNVVLKGPRIDVA
AAVNSSAGDITATTQPGGTINILASGSLRAAPASITDPQPTIALTADNLDIAGSITNSDN
GGGFVSIATRTVGREININAADTTSASSMSLTNDELAHIDAYELALGNANGGTININSEL
NTSGKSMHLSFQSNNDINVNALVRADTLHTIYMGTTGSGKLNVVSGGSVRAGDVYLRSDD
LRLGGAAGTIAGNTVYLDLESSTAALKVGSDPSAQVTTAELKTLSATNIKIGSAAGYLGT
TSVEGTLDLSTQTGLSRVTLEGGAVAINGAVTVPAELELKSSGAVSGSAAVTADKLYVTG
ASVDLGGLNDVNKLVGSASTTFAFKDVDGIQLDSGNGLEGVNADSITLTASSLTQTFSAP
LVANELTLLGGGNYTLSGVANQVSKLTANGISSLDYTGSTSLTLESLTMPSTVTASHINV
NLSGSATLTAKQVDAKTNAVTLAAPTVTVPAGGQVLGGGVIVNTSALNMSGTLTASTVSL
LSSDDIYVGDTFSAVEGSALRLTSATLGKIDAQAIYVSAGYGDDLTVGTVTLPSFTSLYT
QGILDISGTVTASKGLAMAAANYDLTGASIAAGSYAVNFSTSRSNGLMQVNGTQDSTTTY
LNSAMLDAVSGEVLVGGANGVTVAGAVDRGARNIVLVSNSGSIDINAPVTAAGVTLQANS
MNVNAAINATNKVNIAPLTDGVTKYSMVIGADCSTSNCLSFKDLSFINAPKVQFGMSYNT
STIDIAGIGGTGDTASNAAITQITLDASGNIAQTGAIGVSTLNILTPGTVTLNNAANAVS
NVLLGTSTAKAQGVDFKTTTGLNLFNAYVTDTLKLTVGGSLTSTGAIVADKLQVQADGAV
GTSSLALSTKVNYLDVVTNGSTGNSINIVNNSSSAPQALQVDQLVVGSGDGSITLSNYGA
TTIAGPVTTSSGNINVAAHSPLTVSGNVQSTTGNITLEAGASGSSSDKLTINSSVTTGGT
VLLKAGDAILGNGTVTGSTVTRTPNLNPSSPPPVSPPPVSPPPVSPPPVNPPPVNPPPVN
PPPVNPPPVNPPPVNPPPVNPPPVNPPPVNPPPVDPPPVNPPPVNPPPVDPPPVNPPPVN
PPPTADICTIAPNSALCQVLSPPTASEPEKPVQAATKEVIKTITREGSGSGSGSSSGGGS
SSGKGSDSSGGPAATDKDEQKKAEKETATTEKQGTQNEKPPAKTYCN
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgacacatctcgaccaacaccagcgcgctccgcaagggggctaccagctgcagcgcaag
ctgctggctgcaaccatcgcggcatgcttcggcgtcgctcaggccaatcccaccctgcca
caggtggtggcgggccaggccacgttcagccagcagggcaatgtgttctcgatcacgaac
acgccgaacacgatcatcaactggcagagcttctcggtccagcgcgacgagatcacccgc
ttcatccagcaaagcagcgacagcaaggtgctgaaccggatcacggggcaggacccgagc
cagatcctgggttccctgcagtcgaacggccaggtcttcctcatcaacccgaacggcatc
atgttcggcaaggacgcgcgcatcgacgtgaacggcctggtggcatccagcctgcagctc
tcgaacgccgatttcctggctggtaagaacaacttcaacgccgaaggccatgccggcaag
gtcgtgaaccaggggcagatcaccacgccccagggcggcaaggtcttcctgattgcgcct
accgtggagaaccatggcgtgatcaccgcgccgaacggcgaggtgctgctggctgcgggc
aagagcgtgcagctggtggattcctcgaaccctgccatccaggtggtggtgtcggcgcct
gaagaccaggcgctgaacctgggccagatcgtggcgcagggcggccgcgtgggcatctac
ggcgcgctggtgaaccagcgcggcatcgtgaacgccgacagcgccgtgcgcggcgagaac
ggcaagatcatcctgaaggccagccgcaccgtgctggccgatgcaggcagccgaaccacc
gccaccggcgcgggcaagggcggcgatatccagatcctgggcgagaaagtcggcctgaac
ggcgacgccgtggtggacgcgagcggccagcaaggcggcggctcggtgctgctgggcggc
gactaccagggcaagaacgcagcagtgcagaacgcgaagcaaaccttcgttggcaagaac
gccgtggtgaaggccgatgcgctggccagcggcgacggcggtaaagtcatcgtctggggc
gacgaatcggcccaggcctacggcgccatttccgcgcgcagcgcaaacggcaagggcggt
ttcgtcgaaacctccggccactacctcgacgtggcgggcctgcgcgtcgataccacaggc
aaggacaccaatggcgtctggctcctggacccttacaacatcgagatcgtttccagcagc
ggcggctacggcctggccgacatggccgacttcaatggcggcgcgggcggcacggccacc
tcgagcatcaacgcgtccgacatcaatggggcaggcacgaatgtggtgctgttggcgaag
aacgacatcaacgtcaatgccgctgtcaacatcacaacggcgaacgtgggactgaccgca
caggcgggcaacaacatcaacgtgaaccaggccatcacgaccaacggcggcgccgtcacc
ctctctgcgggcgatatcgcatccggcacggccaatgctgccggcacggtctacgttaac
cagggcatcacgaccgctggcggcaacgtggtgctcaagggaccccggatcgatgtcgct
gcggcggtgaactcttccgcgggcgacatcacagcaaccacccagccgggcggcacgatc
aatattctcgcctcgggcagcctgagggcagctccggcctccattacggatccgcagcct
accattgcgctgacggcggacaacctggatatcgcgggcagcatcaccaactcggacaac
ggcggcggtttcgtttcgatcgccacgcgtaccgttggccgggaaatcaatatcaatgcg
gcggacaccacgagcgcaagctccatgtcgctcacgaatgacgagctggcccacatcgat
gcctacgagctggctctgggcaacgccaacggtggcaccatcaacatcaattccgagttg
aatacctcgggcaagagcatgcacttgtcgttccagtcgaacaacgacatcaatgtgaat
gccctggtgcgcgccgacaccctgcataccatctacatgggtacgacgggctcgggcaag
ttgaatgtggtgagcggcggcagcgtccgcgctggcgacgtctacctgcgctcggacgac
ctgcgcctgggcggcgccgccggcactattgcaggcaacactgtctatctggacctggaa
agcagcacggctgcactgaaggtcggctcggacccgagcgcgcaagtcacaacggcggaa
ttgaagactctttccgcgaccaatatcaagatcggcagcgcggccggctacctcggcacg
accagcgtcgaaggtacgctcgatctgagcacacagactggcctgagccgggtgacgctg
gaagggggagcggttgcaataaacggcgcggtaactgtgcctgccgagctggaactgaaa
tcttccggcgccgtgagcgggagcgctgcggtaacggccgacaagttgtacgtcacaggc
gcctccgtcgacctgggtggcctgaacgatgtgaacaagctggtgggttccgccagcact
accttcgcgttcaaggacgtcgatggcattcaacttgatagcggcaacggcctggaaggc
gtcaatgccgacagcattaccctgaccgccagctcgctgacccaaaccttcagtgcaccg
ctggtggccaacgagctgaccctgctcggaggaggcaactacaccttgagcggtgtggcc
aaccaggtgtcgaagctgacggcaaacggaatcagttccctggactacaccggttccacc
agcctgacgctggaatcgctcaccatgccgagcacggtgaccgcatcgcatatcaatgtg
aacctctccggcagcgcaacgctgaccgcgaaacaggtcgatgcgaagaccaacgctgtc
accttggctgcaccaacggtcaccgtacctgccggcggtcaggtgctgggcggcggcgtg
atcgtcaacaccagtgcactgaatatgagcggaacgctgacggcaagcacggtttcactg
ttgtccagcgatgatatttacgtcggcgataccttcagcgcggtggaaggctctgcgctg
cgcctgacttccgcaaccctgggcaagatcgacgcgcaggcaatttatgtctctgcgggg
tatggcgatgacctgaccgtgggtaccgtcactttgccttcgttcacctcgctctacacg
caaggcatcctggacatcagtggcaccgtgacggcgtccaagggcttggccatggccgcg
gcgaactatgacctgacgggcgccagcattgccgccggcagttatgccgtcaacttctcc
acgtctcgctccaatggcctgatgcaggtgaatggcacccaggacagcacgaccacttac
ctcaatagcgccatgctcgacgcggtcagcggcgaggtgctggttggcggcgcgaatggg
gtcaccgtggcaggcgcggtcgaccggggcgcacgtaacatcgtcctggtgtccaactcc
ggctcgatcgacatcaatgcaccggtgacagcggcgggtgtcacgctgcaggcgaattcg
atgaacgtcaacgcagcgatcaatgccaccaacaaggtgaacattgcgccactgacggat
ggcgtcaccaagtattccatggttattggggcggattgctccaccagcaattgcctgtcc
ttcaaggatctctccttcatcaatgctcccaaagtgcagttcgggatgagctataacacc
agcacgatcgacatcgcgggcattggcggcactggagatacggccagcaatgcggccatc
acgcaaatcacactcgacgcttcgggcaatatcgctcaaacgggtgcgatcggcgtgtcc
acgctgaacattcttaccccgggcaccgtgaccctgaataacgccgcgaacgcggtttcg
aatgtcctgctggggaccagtacagccaaggcacagggcgtcgatttcaagaccacgacg
ggcttgaacctcttcaacgcctatgtcaccgatacgcttaagctgaccgttggcgggtcg
ctcacgagtaccggcgccatcgtggccgacaagctgcaggtgcaggcggatggcgctgtg
ggcaccagctctctggcgctgtcgacgaaggtcaactacctggatgtggtcacgaacggc
agcacgggaaattcgatcaatatcgtgaacaacagctcgtcggccccgcaggcattgcag
gtcgaccagttggttgttggcagcggcgatggcagcatcacgctgagcaattacggcgcg
accacgatcgcgggtccggtgaccaccagcagcggcaacatcaatgtggcagcccatagc
ccgttgaccgtcagcggcaacgtgcagtccacgaccggcaacatcaccctcgaggcaggt
gcaagcggttcgagcagcgacaagctgacgatcaacagctcggtgaccactggcggaacg
gttctgctgaaggcaggtgatgccattctgggcaacggcaccgtcaccggcagcaccgtc
accaggacgccaaacctgaatccttcgagtccgccaccggtgagccctccgcccgtgagc
ccaccgcccgtgagcccgccgcccgtgaatccaccgcccgtgaatcctccgccggtgaac
ccgccgccggtcaatccgccgccagtgaatccgccgccggtcaatccacctccggtgaat
ccgccgcccgtgaatccaccgccggtgaacccgccgccggtcgatccgccgccggtcaac
ccgccgccggtgaatccgcccccggtcgatccgccgccagtgaatccgccgccggtgaat
ccgccgccgacggccgacatctgcaccatcgctccgaattcggcgctgtgccaggtgctg
tcgccgcctaccgcgagcgagccggaaaagccagtgcaggccgcaaccaaggaagtgatc
aagaccatcacgcgtgaaggttcagggtcgggatccggttcctcctcgggtggtggcagc
agcagcggcaagggctccgacagcagcggtggtccggccgcgaccgacaaggacgagcag
aagaaggccgagaaggaaacggccaccactgaaaaacagggaacgcaaaatgaaaaacca
cctgctaaaacctattgcaactaa
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