Massilia endophytica: LSQ66_14790
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Entry
LSQ66_14790 CDS
T09693
Name
(GenBank) PAS domain S-box protein
Organism
meny
Massilia endophytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
Response_reg
PAS_3
PAS_9
HATPase_c
PAS
PAS_8
HisKA
PAS_10
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
UGQ45059
LinkDB
All DBs
Position
complement(3239105..3242401)
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AA seq
1098 aa
AA seq
DB search
MNLSGRAHLKASDCYQPQGGGAVGELVRSFDWPSTPLGSMDGWTPALRTTVDIVLNSPIA
MVLMWGPEHVMIYNDGYAEIAGKRHPAALGGKVPEIWPEIWDWNRAILESGFRGELRQEL
EAGMVVERNGVPEEVWFDLFYTPVHDSCGEVGGVLCSVVEVTERVRRARSLDRQHLQLEE
ESKLLRQLFAQAPSFMAVLRGPQHIFELANEPYARLTGGRELIGKPVALALPELREQGFV
ELLDRVYASGEPFVGRQMKVELRAPDCGIQARYLDFVYQPLRADNGAVTGVFLEGSDVTD
RIITEERLRMAQQAGGIGSFEWFPATGKVLASSTYRRIWGLPDDVDITADLLVSLVDERD
RDRVGPLRIREGGNPLEYAEYRIRRPDNGELRWLARQGEVTEGPTPDRRRYVGVVFDITE
RKQIEQELRTSQDRLAAIFGQASVGLSELNLQGRFQRVNGALCQMLGRTQQELLGLHMDD
LIHPDDKAENTAYVEQLKRSGQPFTLEKRYQKPDGSWVWISSSMSRLDDEMGQPLALIAV
KTDITERRRIEVALRDLNDTLEQRVAREIAQRDKAEEALRQSQKMEAVGQLTGGVAHDFN
NVLQIISGNLHLLHHHLGGDEMAKRRLEMAVAAVERGAKLSSQLLAFARRQPLQPVVSDL
GRLVRNMDELLRRAMGEAVELVTVTGSGLWNTMVDPGQIENVILNLAINARDAMKGEGRL
TIELGNAVLDEYYVNNLIDVPSGQYVMLSVTDTGCGMPSEVLQRAFEPFFTTKPEGEGTG
LGLSMAYGFVKQSRGHIKIYSEVGQGTSVKIYLPRSMQAEAEESEQEDGPIRGGDETILV
VEDDAGVRQVVLDMVRALGYSVLEAENGEKALRILEGGAHVDLLFTDVVMPGPLRSPELA
RLAKELVPDLAVLFTSGYPQNSIVHGGQLDAGLELLSKPYRRDELARKLRHVLNNREHAI
KARQRRHGAASDLLPPMPSIEQNASLRVLVVEDNLDSQQMVCELVGMLGHTVSGVSDGET
AWELMQNQDFDILFTDVSLPGMSGIELARRAQRRKSIRVIFSTGYGMDKVEGLEFRASLL
RKPYDLLELKAALDQARS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgagcggccgtgcgcacctgaaggcaagcgattgctaccagccgcagggaggc
ggcgccgtgggcgaactggtacggtccttcgactggccctccacgcccctgggcagcatg
gatggctggacgcccgcgctgcgcaccacggtcgatatcgtgctcaattcacccatcgcc
atggtcctcatgtggggccccgagcacgtgatgatctacaacgacggctatgccgaaatc
gcaggcaagcgccaccccgccgcgcttggcggcaaggtgcccgagatctggcccgaaatc
tgggactggaaccgcgctatccttgagagcggcttccgtggggagctgcgccaggaactg
gaagcgggcatggtcgtggaacgcaacggcgtccccgaggaagtctggttcgatctcttc
tacactcccgtacacgacagctgcggcgaggtgggcggggtgctgtgctccgtggtggaa
gtgacggagcgcgtgcgccgcgcccgttcgctggaccgccagcatttgcagctggaagag
gaaagcaagctgctgcgccagctgttcgcccaggcgcccagcttcatggccgtgctgcgc
ggaccccagcatatcttcgagctggccaatgagccttatgcgcgtcttaccggtgggcgg
gagctgatcggcaagccggtggcgctcgcgctgcccgagctgcgcgagcagggcttcgtc
gagctgctggaccgcgtctacgccagcggtgaaccctttgtgggcaggcagatgaaggtg
gaactgcgcgcgccggattgcggcatccaggcgcgctacctggatttcgtctaccagcct
ttgcgggccgacaatggcgccgtgacaggcgttttcctggaaggctcggacgttacggac
cgcatcatcaccgaggaaaggctgcgcatggcccagcaggcgggcggcatcggcagcttc
gaatggttccccgccaccggcaaggtgctggcatcgagcacctaccgccgcatctggggg
ctgccggacgatgtggatatcaccgccgacctgctggtatcactggttgacgaacgtgac
cgcgaccgcgtcggtccgctgcgcatacgcgaaggcggcaatccgctcgagtatgcggag
taccgcatccgccggccggacaatggggagctgcgctggctggcgcgccagggcgaagtg
accgaaggtcccacgccggaccggcgccgctacgtgggggtggtgttcgatatcacggaa
cgcaagcagatcgagcaggagctgcgcaccagccaggaccgccttgccgccatctttggc
caggcctccgtcggcctctccgaactgaacctccagggccgcttccagcgcgtgaacggc
gccctgtgccagatgctggggcgcacccagcaggagctgctcggcctgcacatggacgac
ctgatccacccggatgacaaggccgagaacacggcgtacgtggagcagctgaaacgcagc
ggccagcccttcacgctggagaagcgctaccagaagccggacggttcctgggtctggatc
tccagcagcatgagccgcctggacgacgaaatgggccagccgctggcgctcattgcggtg
aagaccgacatcacggaaaggcggcgcatcgaagtggcgctgcgggacctgaacgacacc
ctggaacagcgcgtggcgcgcgagatcgcccagcgcgacaaggccgaggaggcgctgcgc
cagtcgcagaaaatggaggcggtgggccagcttaccggcggcgtggcgcacgacttcaac
aacgtcctgcagatcatctccggcaacctgcaccttttgcatcaccacctcggcggcgac
gaaatggcgaagcgccgcctggagatggcggtggccgccgtggagcgcggcgcgaagctg
tcctcgcagctgctggcattcgcgcggcgccaacccttgcagcctgtggtgtccgacctg
ggtcgcctggtgcgcaacatggacgaactgctgcgccgcgcgatgggcgaggcggtggag
ctggtgacggtgaccggcagcggcttgtggaacaccatggtggacccgggccagatcgag
aacgtcatcctgaacctcgccatcaacgcgcgcgacgccatgaaaggcgaaggccgcctg
accatcgagcttggcaacgcggtgctggacgagtactacgtcaacaacctgatcgacgtg
ccctctggccagtacgtgatgctgtcggtgaccgataccggctgcggcatgccgtccgag
gtgctgcagcgcgccttcgagcccttcttcaccaccaagccggaaggcgagggaactggc
ctcggcctttccatggcctatggcttcgtcaagcaaagccgcggccatatcaagatctac
agcgaagtggggcagggcacgagcgtgaagatctacctgccgcgctccatgcaggccgag
gccgaggagtcagagcaggaagacggcccgattcgcggcggcgacgaaaccattctggtg
gtggaggacgacgcaggcgtgcgccaggtggtgctggacatggtgcgcgccctcggctac
agcgtattggaagcggagaacggcgaaaaggccctgcgcatcctggaaggcggcgcccac
gtggacctgctgttcacggacgtggtcatgcccggccccttgcgcagccccgagctggcg
cgcctggccaaggaactggtgcccgacctggccgtgctgttcacctcgggctatccgcag
aactccatcgtgcatggcggccagctggatgcgggccttgaactgctgagcaagccgtac
cggcgcgacgaactggcgcgcaagctgcgccatgtgctgaacaaccgcgaacatgccatc
aaggcgcggcagcgccgccatggcgccgccagcgacctgctgccgcccatgccctccatc
gagcagaacgcctcgctgcgcgtgctggtggtggaggacaacctggattcgcagcagatg
gtgtgcgagctggtgggcatgctgggccacaccgtcagcggcgtgtccgacggcgaaacg
gcctgggagctgatgcagaaccaggacttcgacatcctgttcacggacgtgagcctgccc
ggcatgtccggcatcgaactggcgcgcagggcgcagcggcgcaagtccatacgcgtcatc
ttctccaccggctacggcatggataaagtggaaggcctggagttccgcgccagcctgctg
cgcaagccctacgatctgctggagctgaaggcggcgctcgaccaggcccgctcctga
DBGET
integrated database retrieval system
