Massilia endophytica: LSQ66_15940
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Entry
LSQ66_15940 CDS
T09693
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
meny
Massilia endophytica
Pathway
meny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LSQ66_15940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meny03400
]
LSQ66_15940
Enzymes [BR:
meny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LSQ66_15940
DNA repair and recombination proteins [BR:
meny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LSQ66_15940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
UGQ45275
LinkDB
All DBs
Position
3479564..3480466
Genome browser
AA seq
300 aa
AA seq
DB search
MKQQFTLDLPPGYRVQDVMAFHSRDAESVAEEVSPERLRKGMLLDGVPVVLTVELGKAAL
CEAEADLPGKRKFPDQLLAKVHEAARNILGLRIDPADFSAFARNDKLLGPLVRAQPGLRI
VQSATVFEALTWAIIGQQINLPFAISLRRTFILQAGRQHSSGLWCYPEAADVVKLTAEDL
TSRKFSTAKAETLLRFAGLVAGGELDLVPSAANPIETISANLLAVKGIGPWTVNYGLLRG
YGYADCSLHGDVAIRAALQRLLGEESKPDMARTERILQQYQPHRTMAAAHLWASLAATAG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcaattcacgctcgacctgcctcccggctaccgggtgcaggatgtgatggcc
ttccacagccgcgacgcggaaagtgtcgcggaagaggtatccccggagcgcctgcgcaag
gggatgctgctcgacggcgtgcccgtcgtgctcacggtggaactgggcaaggctgcactt
tgcgaagcggaggccgatctgccgggcaagcgcaagtttccggaccagctgctcgccaag
gtgcacgaagcggcccgcaatatcctgggcttgcgcatcgaccctgccgatttcagcgcc
tttgcgaggaacgacaagctgctcggcccccttgtccgtgcccagcccggcttgcgcatc
gtgcagtcggctaccgttttcgaggcgctgacctgggccatcatcgggcagcagatcaat
ctgccgtttgccatttccctgcgccgcaccttcatcctgcaggccggacggcagcacagc
agcggcctctggtgctatccagaggccgcagatgtcgtcaaattgacggcagaagacctc
acaagccggaagttctcgacagcgaaagcggaaaccctgctgcgcttcgccgggcttgtg
gcgggcggcgagctcgatctcgtccccagcgcggccaatcccatcgagaccatcagcgcc
aatctgctggccgtcaagggcatcggaccctggacggtgaactacggcctgctgcgcggc
tacggctatgcggactgttctttgcacggcgacgtggccatccgcgccgccctccagcgc
ctgctgggcgaggaatcgaagccggacatggcgcgcaccgaacgcatcctccagcaatac
cagcctcaccgcaccatggccgccgcccatctctgggccagcctggccgcgacagcgggc
tga
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