Massilia endophytica: LSQ66_16555
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Entry
LSQ66_16555 CDS
T09693
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
meny
Massilia endophytica
Pathway
meny02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LSQ66_16555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meny02000
]
LSQ66_16555
Transporters [BR:
meny02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LSQ66_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_22
AAA_29
RsgA_GTPase
SMC_N
DUF87
TsaE
AAA_21
AAA_30
Zeta_toxin
MMR_HSR1
cobW
AAA_33
Rad17
T2SSE
nSTAND3
Adeno_IVa2
AAA_23
HUTI_composite_bact
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UGQ45391
LinkDB
All DBs
Position
3616096..3617847
Genome browser
AA seq
583 aa
AA seq
DB search
MSLSRLIGGFVRSHWRAYAGSAVMLTGVAIIGIWIPRKIGSMVDDLAAHRLGPHELLTGV
GLLLLVGLLNYALRVAWRIRLYSAAYQLGVELRTRFYRRLSRQGPAFYQKQRTGDLMALA
TNDIDAIEMAAGEAALAGFDGSLTLAMVLGMMLLGVDWRLALVALLPFPLMAYAFWRISS
HIHTASADSLKRFSALNEHVQETLSGVRTLRTLGLEQRSSARFSELAGHAAQANLTSQRW
EAAYEPAFGLTLSAAAVLSLGYGGYLVWNGQLSIGALTSFSMYLSLLIWPMFAAGWVLSL
IERGRAAWARLQPMLDEPLSIDDRGTVTAFEPGELVLDDITVAYPGQTTPALSGLSLTLK
PGQTLGLVGPTGAGKSTLLRVLLRQLTPQQGAVRWGGHALEEYKLATLRDAISWVPQESF
LFSASIAENIALARPEATRAEIEHAADLAAIHDDIQLFPQKYETEVGERGITLSGGQRQR
VAIARALLSDNDLLLLDDALSAVDTGTETRILEHLEELRRARPERSAIIASHRLSAVVDA
DRIVVLRDGRISESGTHEELLALNGWYASQWRYQQLEASLDAA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatcgaggcttatcggcggcttcgtgcgttcgcattggcgcgcctatgccggt
tcggctgtcatgctgaccggcgttgccatcatcggcatctggattccccgaaaaatcggc
tccatggtggacgaccttgccgcccaccgtcttggtccccatgagctgctgaccggcgtc
ggcctcctgctcctggtcggactgctcaactacgccctgcgcgtggcctggcgcatccgc
ctctactcggccgcctaccagctgggcgtggagctgcgcacgcgcttctaccgccgcctt
tcgcgccaggggccggccttctatcagaagcagcgcaccggcgacctgatggcgctggcc
accaacgacatcgacgccatcgaaatggcggcgggcgaggcggcgctggcgggtttcgac
ggctcgctcacgctggccatggtgctgggcatgatgctgctgggcgtggactggcgcctc
gccctcgtggccctgctgcccttccccctgatggcctacgccttctggcgcatttcgagc
cacatccacaccgcctccgccgattccctgaagcgcttcagcgcattgaacgaacatgtg
caggagaccctctccggggtgcgcaccctgcgtacgctcggcctggaacagcgcagcagc
gcgcgcttctccgaactggcggggcatgccgcccaggccaacctcacctcccagcgctgg
gaggccgcctacgaacccgcgttcggcctcacgctgtccgcggcggccgtgctgtccctg
ggctacggcggctacctggtatggaacggccagctctccatcggcgcgctgaccagcttc
agcatgtatctgagcctgctgatctggcccatgttcgcggcgggctgggtgctgtcgctg
atcgaacgcgggcgcgcagcctgggcgcggctccagcccatgctggacgagccgctctcc
atcgacgaccgcggcaccgtcacggcattcgagccgggagaactggtgctggacgatatc
accgtggcttaccccggccagaccacgcctgcgctctccggcctgtcgctcacgctcaag
ccgggacagacgcttggcctcgtggggccgacgggcgcgggcaagtccaccctcctgcgc
gtgctgctgcgccagctcacgccgcagcagggcgcggtacgctggggcggacatgccctg
gaggagtacaagctggccacgctgcgcgacgccatcagctgggtgccgcaggaatccttc
ctgttctcggccagcatcgcggagaacattgcgctggcgcggccggaagcgacgcgcgcc
gaaatcgagcacgccgccgacctcgcagccattcacgacgacatccagctcttcccgcag
aagtacgagaccgaagtgggcgaacggggcatcaccctctcgggcggccagcgccagcgc
gtggcgattgcgcgcgcgctcctgtccgataacgatctcctgctgctggacgatgccctg
tcggccgtcgataccggcaccgagacgcgcatcctggaacacctcgaagagctgcgccgc
gcgcggcccgaacgcagcgccatcatcgccagccaccgcctgagcgccgtggtggacgcg
gaccgcattgtggtgctgcgcgatggccgcatcagcgagtcgggcacgcatgaagaactg
ctcgccctgaacggctggtatgccagccagtggcgctatcaacaactggaggccagcctc
gatgcagcctga
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