Massilia endophytica: LSQ66_17735
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Entry
LSQ66_17735 CDS
T09693
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
meny
Massilia endophytica
Pathway
meny00540
Lipopolysaccharide biosynthesis
meny01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LSQ66_17735 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
meny01005
]
LSQ66_17735 (waaA)
Enzymes [BR:
meny01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LSQ66_17735 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LSQ66_17735 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
LSQ66_17735 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
LSQ66_17735 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
meny01005
]
Lipid A
LSQ66_17735 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
UGQ45614
LinkDB
All DBs
Position
complement(3873362..3874639)
Genome browser
AA seq
425 aa
AA seq
DB search
MLRLYTLVWWLSLPLVLLRLWLRGRQEPGYRQHWNERLGIYGRRAANDEPHTIWVHAVSV
GETRAAEPLVDALLKQYPLSRIVLTHMTPTGRATGKSLFGKHGARLVQSYLPYDMPSLVG
RFVRHFEPRICILMETEVWPNLIAECGRRKVPVMLANARLSERSLRKAQRFGGIMREAAQ
GIGHVAAQTEADAERIRSLGAPKVDVTGSIKFDVVVPPAALALGAQLRQQIGQRPVLLCA
STREGEEELILDAFARAALPEGTLLLLVPRHPQRFDAVEAMVHERGFAVQRRSALREPGA
VVEGATRVLLGDSMGEMFAYYSACDIAFIGGSLQPLGGQNLIEPAALGKPVLVGQHTFNF
AQATEDALAAGGARRVADADELMRTAAALLQDSAAREAMGRNALSFANQHRGATARTLAL
LPPGL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcctctataccctggtgtggtggctgtccctgcccctggtgctgctgcgcctg
tggctgcgcggacggcaggagccgggctaccgccagcactggaacgaacgcctcggcatc
tacggccgccgcgccgcgaacgacgagccgcataccatctgggtgcatgccgtctccgtc
ggcgaaacgcgcgctgcggagcccctggtcgacgccctgctcaagcagtatccgctgagc
cgcattgtgctcacgcacatgacgccgaccggccgcgctacgggcaagtccctgttcggc
aagcacggcgcgcgccttgtgcagtcctatctgccttatgacatgccatcgctggtgggc
cgcttcgtccgccacttcgaaccgcgcatctgcattctgatggaaacggaggtctggccg
aatctcatcgccgaatgcggccgccgcaaggtgcctgtcatgctggcgaatgcgcggctc
agcgaacgctcgctgcgcaaagcacagcgtttcggcggcatcatgcgggaagcggcgcag
ggcatcggacatgtggcggcacagaccgaagccgatgcagagcgcatccgcagccttggc
gcgccgaaggtcgacgtcacgggcagcatcaagttcgacgtcgtggtgcctcctgccgcg
ctggcgctgggcgcccagctgcgccagcagatcggccagcgccccgtgctgctgtgtgcc
agcacacgcgaaggcgaggaggaattgattctcgatgccttcgcccgcgccgcgctcccc
gaaggcacactgctgctcctggtgccgcgccacccgcagcgcttcgatgcggtggaagcc
atggtgcacgaacgtggcttcgccgttcagcgccgctcggcactgcgcgagcccggcgct
gtggtggagggggcaacgcgggtgctgctcggcgactcgatgggcgaaatgtttgcttac
tactccgcctgcgatatcgccttcatcggcggcagccttcagcccctgggcgggcagaac
ctgatcgaaccggcggcgctgggcaagccggtgctggtggggcagcacaccttcaacttt
gcacaggcgaccgaagatgcgctcgcagccggcggcgcgcgccgcgtggccgatgcggac
gaattgatgcgcaccgccgcggccctgctacaggacagcgctgcacgcgaagcgatgggg
cggaatgcactaagcttcgccaaccagcaccgcggcgccaccgcccgcaccctcgcgctg
ctgcctcccggcctctga
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