KEGG   Massilia endophytica: LSQ66_17775
Entry
LSQ66_17775       CDS       T09693                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
meny  Massilia endophytica
Pathway
meny00521  Streptomycin biosynthesis
meny00523  Polyketide sugar unit biosynthesis
meny00525  Acarbose and validamycin biosynthesis
meny00541  Biosynthesis of various nucleotide sugars
meny01100  Metabolic pathways
meny01110  Biosynthesis of secondary metabolites
meny01250  Biosynthesis of nucleotide sugars
Module
meny_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
meny_M01026  dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
Brite
KEGG Orthology (KO) [BR:meny00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    LSQ66_17775 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LSQ66_17775 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    LSQ66_17775 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LSQ66_17775 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    LSQ66_17775 (rfbB)
Enzymes [BR:meny01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     LSQ66_17775 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 adh_short
Other DBs
NCBI-ProteinID: UGQ45622
LinkDB
Position
complement(3880978..3882048)
AA seq 356 aa
MIFVTGGAGFIGSNFVLDWLQQSDEPVLNFDKLTYAGNLNNLASLKGDARHIFVRGDICD
REQVESLLKEHKPRAIVHFAAESHVDRSIHGPGEFINTNINGTFSLLEAARAYWSGLPEA
EKADFRFLHVSTDEVYGTLGPEDPPFSETTPYAPNSPYSASKAASDHLVRSYHHTYGFPT
LTTNCSNNYGPYHFPEKLIPLMIANAQAGKPLPIYGDGQQIRDWLYVSDHCAAIRRVLQD
GRLGETYNVGGWNEMANLDVVHVLCDILDSLKPKADGSSYRSQITYVKDRPGHDRRYAID
ARKLERELGWKPAETFQTGIRKTVRWYLDNQDWVRDVQSGAYAKWMETNYFNREVA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgattttcgtgactggcggtgctggttttatcggctctaacttcgtcctcgactggctc
cagcagtcggacgagcctgttctcaacttcgataagctgacctacgcaggcaacctgaac
aacctggcctcgctcaagggcgatgcgcgccatatcttcgtgcgcggcgatatctgcgac
cgcgaacaggtggaaagcctgctcaaggaacacaagccgcgcgccatcgtccacttcgcg
gcggaaagccatgtggaccgctccatccacggtcccggcgagttcatcaacaccaatatc
aacggcaccttcagcctgctcgaagcggcccgcgcttactggagcggcctgcccgaggcg
gagaaggcggacttccgcttcctgcacgtgtccaccgacgaagtctacggcactctcggc
ccggaggatcctcccttcagcgagaccacgccctatgcgccgaacagcccgtattcggcg
tccaaggcggcttccgaccacctggtgcgctcctaccaccatacctacggcttccccacg
ctgaccaccaactgctccaacaactacggcccctaccacttcccggaaaagctgattccg
ctgatgatcgccaacgcccaggcgggcaagcccctgcccatctacggtgacggccagcag
atccgcgactggctgtatgtgagcgaccactgcgccgccatccgccgcgtgctgcaggac
ggccgcctgggcgagacctataatgtgggaggctggaacgagatggccaacctggatgtg
gtgcatgtgctgtgcgacatcctggactcgctcaagcccaaggccgacggcagcagctac
cgcagccagatcacctatgtgaaggaccgcccggggcacgaccgccgctacgccatcgat
gcacgcaagctggaacgcgagctgggctggaaaccggccgagaccttccagaccggcatc
cgcaagaccgtgcgctggtatctggataaccaggactgggtgcgcgacgtgcagtccggc
gcctatgccaagtggatggaaaccaattacttcaaccgggaagtcgcctga

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