Massilia endophytica: LSQ66_17775
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Entry
LSQ66_17775 CDS
T09693
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
meny
Massilia endophytica
Pathway
meny00521
Streptomycin biosynthesis
meny00523
Polyketide sugar unit biosynthesis
meny00525
Acarbose and validamycin biosynthesis
meny00541
Biosynthesis of various nucleotide sugars
meny01100
Metabolic pathways
meny01110
Biosynthesis of secondary metabolites
meny01250
Biosynthesis of nucleotide sugars
Module
meny_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
meny_M01026
dTDP-Qui4NAc biosynthesis, Glc-1P => dTDP-Qui4NAc
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LSQ66_17775 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LSQ66_17775 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LSQ66_17775 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LSQ66_17775 (rfbB)
00525 Acarbose and validamycin biosynthesis
LSQ66_17775 (rfbB)
Enzymes [BR:
meny01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LSQ66_17775 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
UGQ45622
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All DBs
Position
complement(3880978..3882048)
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AA seq
356 aa
AA seq
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MIFVTGGAGFIGSNFVLDWLQQSDEPVLNFDKLTYAGNLNNLASLKGDARHIFVRGDICD
REQVESLLKEHKPRAIVHFAAESHVDRSIHGPGEFINTNINGTFSLLEAARAYWSGLPEA
EKADFRFLHVSTDEVYGTLGPEDPPFSETTPYAPNSPYSASKAASDHLVRSYHHTYGFPT
LTTNCSNNYGPYHFPEKLIPLMIANAQAGKPLPIYGDGQQIRDWLYVSDHCAAIRRVLQD
GRLGETYNVGGWNEMANLDVVHVLCDILDSLKPKADGSSYRSQITYVKDRPGHDRRYAID
ARKLERELGWKPAETFQTGIRKTVRWYLDNQDWVRDVQSGAYAKWMETNYFNREVA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgtgactggcggtgctggttttatcggctctaacttcgtcctcgactggctc
cagcagtcggacgagcctgttctcaacttcgataagctgacctacgcaggcaacctgaac
aacctggcctcgctcaagggcgatgcgcgccatatcttcgtgcgcggcgatatctgcgac
cgcgaacaggtggaaagcctgctcaaggaacacaagccgcgcgccatcgtccacttcgcg
gcggaaagccatgtggaccgctccatccacggtcccggcgagttcatcaacaccaatatc
aacggcaccttcagcctgctcgaagcggcccgcgcttactggagcggcctgcccgaggcg
gagaaggcggacttccgcttcctgcacgtgtccaccgacgaagtctacggcactctcggc
ccggaggatcctcccttcagcgagaccacgccctatgcgccgaacagcccgtattcggcg
tccaaggcggcttccgaccacctggtgcgctcctaccaccatacctacggcttccccacg
ctgaccaccaactgctccaacaactacggcccctaccacttcccggaaaagctgattccg
ctgatgatcgccaacgcccaggcgggcaagcccctgcccatctacggtgacggccagcag
atccgcgactggctgtatgtgagcgaccactgcgccgccatccgccgcgtgctgcaggac
ggccgcctgggcgagacctataatgtgggaggctggaacgagatggccaacctggatgtg
gtgcatgtgctgtgcgacatcctggactcgctcaagcccaaggccgacggcagcagctac
cgcagccagatcacctatgtgaaggaccgcccggggcacgaccgccgctacgccatcgat
gcacgcaagctggaacgcgagctgggctggaaaccggccgagaccttccagaccggcatc
cgcaagaccgtgcgctggtatctggataaccaggactgggtgcgcgacgtgcagtccggc
gcctatgccaagtggatggaaaccaattacttcaaccgggaagtcgcctga
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