Massilia endophytica: LSQ66_17820
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Entry
LSQ66_17820 CDS
T09693
Name
(GenBank) Hpt domain-containing protein
KO
K06596
chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Organism
meny
Massilia endophytica
Pathway
meny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LSQ66_17820
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
meny01001
]
LSQ66_17820
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
meny02022
]
LSQ66_17820
02035 Bacterial motility proteins [BR:
meny02035
]
LSQ66_17820
Protein kinases [BR:
meny01001
]
Histidine kinases
CheA family [OT]
LSQ66_17820
Two-component system [BR:
meny02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
LSQ66_17820
Bacterial motility proteins [BR:
meny02035
]
Pilus system
Twitching motility proteins
LSQ66_17820
Chemosensory pili system proteins
LSQ66_17820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hpt
Response_reg
CheW
HATPase_c
H-kinase_dim
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
UGQ45630
LinkDB
All DBs
Position
complement(3889243..3894633)
Genome browser
AA seq
1796 aa
AA seq
DB search
MNKADLPTSSTPPFDPGPLSWVMGEIREALARSKTALFEAGGRDPEDQATALQHAKSHLH
QAHGALQMVDVDGVVLVTGLAEQALDRFKDGSLKVNADNVQVVANLYQALAEYLQELVDG
APFQPVRLFPYFRDMQRMLGAERVHPADLFFPDFSQWPELPATPDAGVPDFAALRQRFER
ALLPFLKAADAAAQAASAAALRDAVAAVADTQADRRLRVFWRTMQAFAELVASGQLPNSL
YVKQLFGMINMQIRLLSQAAPQLPEAMLRDALFFVAAADESQLSPLALQLRSAYALDGMV
PQNYDERRYGQLDEQALARAGNALAQAKAAWHRIEQADPDPQVHSEFTAALSQLAGEAGK
LGLAPLAALMRQLSSVADGALAVGRSEELGLEMAGALLFAEHALAQIRRLPDGFTAYADT
IGARLQALLAGDTPPAPAQWQEALAQQLQQDDTVAALAAEMRAALRQVEKVLDEFYSDAS
RRSELTGLDPVLHQLEGALSVLDQDDAMRAAAHVRSAVATLAQDSGDNARQLDEIAQNVG
AMGFFVDMLAQNAAGARERFVFDEAQGSFRAVPFRKIAGPESIPVLDEKVPAPPPLSPAA
AETVADEAADAELLEVFIAEAQEVLGLIGEKLGPARPELQTVDGLTVLRRSFHTLKGSGR
MVGLTEFADAAAAIERVLNVRLADERAADEHLLALLDWARAELDVWVGEIVAHGMSPRQA
APVMQAASQVQAGYGFELPAEPVEDLEAEATPDIAVAEPEEPEATGDNVKFVGRLAIPLP
LYNIYVSEADGLVRLLAEDFAEWRQAAQRPVNTEALHAVHTLTGISGTVGFKALRELAHA
LETSMQALSAPAPQLDPAQHDLLDFAVARIRQMLESFRAGEMPDEQPELIAALDAMREEV
AAPRAQGELNARLDSMFADAASAPAPVTEDDLAARLDALFTDTYHALIANPPPLPERGSE
LRPTPQLAKQDEHIDDLFNAAFDDAFAEPPLTQVAPPPLPQQPVAIPPVAVPAAPEPPPG
PLEALGLEPPSAPEPDYAAAPELVAAEPDPEIELLALPAAEATLSETAPSAIGDDIDPDL
LPVFLEEGADLLPQVGETLRAWHNAPADTAHAHTLQRILHTVKGSARMAGAMRLGQHAHE
IETHVENMVHAGSVPQQAFDELMAHYDHALLLFEQLQNPSPVEAPQAEEQPEAEAGEAAD
AAARQPLVRVRADLLDRLVNQAGEVAITRSRLENEVGVLRTSLADFQDNLARLRRHLREV
EMQAETQIASRLSIAGEREFDPLEFDRFTRLQELTRMMAESVNDVAAFHEGLIRSVDSAS
DDLAQQARMTRELQRDLMRVRMVPFASIAERLFRIARQGAKEMDKRVNLDIRGGAVEMDR
GVLERMSAPFEHLLRNAIVHGIESREERSAHGKQETGELLVEVSQQGNEVILEFSDDGAG
LDLDRIRARARERGLSGDAELGDADTAQLIFEPGFSTADTLTELAGRGVGMDIVRAEASA
LGGRVEIWTERGKGTRFTIHLPLTLAVTQVVLLAAGGKTYAIPAVLVEQVLQMKEGALAE
ASASGMLTMQGQSAALHYLPALLGDSAARPLAQRSTPVLLLRSGADRQALHVDEILGNRE
VVIKNIGPQLARVPGIAGATVLGSGEIVLILNPVALAQQPGRAAPSALPPVQAEGLIMVV
DDSVTVRKVTQRLLEREGYAVMLAKDGVDALEQIQDRKPDLMLVDIEMPRMDGFDLTRHI
RGGEATKDIPIIMITSRSADKHRNYAMQLGVNAYFGKPFQEPILLGAIAGLLPKQP
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctgatctgccgacttcgtccacgccgcctttcgatccgggcccgctttca
tgggtcatgggcgaaatccgcgaggcgctggcgcgttcgaagacggcgctgttcgaggcg
ggcggccgcgatcccgaagaccaggccacggcgctgcagcatgcgaaatcccacctgcac
caggcgcatggcgcgctgcagatggtggacgtggacggcgtggtgctggtcaccggcctg
gccgagcaggcgctggaccgcttcaaggacggcagcctgaaggtgaatgcggacaatgtg
caggtggtggccaacctctatcaggcgctcgcggaatacctgcaggaactggtggacggt
gcgcccttccagccggtgcgcctcttcccctatttccgcgacatgcagcgcatgctgggc
gcggagcgcgtgcatccggcggacctgttcttccccgatttctcgcaatggcccgagctg
cctgcaacgccggacgccggtgtgccggacttcgctgcgctgcgccagcgtttcgaacgc
gcgctcctgcctttcctgaaagcggccgacgccgctgcacaggcggcatcggccgccgcc
ctgcgcgatgccgtggcggcggtggcggacacgcaggccgaccgccgcctgcgcgtcttc
tggcgcaccatgcaggccttcgcggaactggtggcgtcgggccagttgcccaacagcctg
tatgtaaagcagctgttcggcatgatcaatatgcagatccgccttctgtcgcaagccgcg
ccgcaactcccggaagcgatgctgcgcgacgcgctgttctttgtcgcagcggcggacgaa
tcgcagctcagccccctggcgctacaactgcgcagcgcctatgccctggacggcatggtg
ccgcagaactacgatgaacgccgctacggccagctggacgagcaggcgctggcccgcgcc
gggaatgcgctggcacaggccaaggcggcctggcaccgcatcgagcaggccgaccccgat
ccgcaagtacacagcgagttcactgccgccctgtcgcaactggccggagaggcgggcaag
ctgggtctcgcgccgctggcagcgctgatgcgccagctgtccagcgtagccgatggcgcg
ctggctgtagggcgaagcgaggaactggggctggaaatggcgggcgcgcttctgtttgcg
gagcatgcgctggcgcagattcgacgcctgccggacggttttaccgcctatgccgatacc
atcggcgcgcgcctccaggcccttctggcgggcgacacgccgcctgcgcccgcgcagtgg
caggaggcgctggcccagcagctgcagcaggacgacacggtggcggcgctcgccgccgaa
atgcgggccgcgctgcgccaggtggagaaggtgctggacgagttttactccgatgcgtcg
cgccgttccgagctcaccggcctcgaccctgtgctgcaccagctggaaggcgcgctctcg
gtgctggaccaggacgacgccatgcgtgcggcagcgcacgtgcgcagcgccgttgcgacc
ctggcgcaggacagcggcgacaacgccagacagctggacgagattgcgcagaacgtcgga
gccatgggctttttcgtggacatgctggcccagaacgccgcaggagcgcgcgagcgcttc
gtattcgacgaggcgcaaggcagcttccgtgcggtgccgttccgtaagatcgctggtccc
gaatcgattccggtgctggacgagaaagtgcccgcgccgccgccgctatcgccagctgcc
gctgagacagtggcggacgaggcggcggacgccgagctgctcgaagtgttcatcgccgaa
gcgcaggaagtcctgggactgattggcgagaagcttggcccggcgcgccctgagctgcag
acggtggatggactgaccgtgctgcgccgctccttccacacgctgaagggtagcgggcgc
atggtggggctcacggaattcgccgacgcggcagccgccatcgaaagagtgctgaatgtg
cgccttgccgacgaacgcgcggcggatgaacacctgctggcgctgctcgactgggcgcgc
gcagagctggatgtgtgggtcggcgagatcgtcgcccatggcatgtcgccgcgccaggcc
gctcccgtcatgcaggctgcgtcgcaggtgcaggcgggctatggcttcgaattgccggcc
gagccggtggaggacctggaagcggaagcgacgccggatatcgcggtggccgagccggag
gaaccggaagccacaggcgacaacgtcaaatttgtcggccgcctcgcgataccgctcccg
ctctacaacatctatgtgtcggaggcggacggcctggtgcgcctgctggcggaagatttc
gccgaatggcgccaggccgcgcagcggcccgtcaacacggaagcactgcatgccgtgcac
acgctgaccggcatttcgggcacggttggtttcaaggcattgcgcgagctcgcccacgcg
cttgaaacgagcatgcaggccctgtcggcgcccgcaccgcagctggacccggcgcagcac
gatctgctggatttcgcggtcgcccgcatccgccagatgctggaaagcttccgggcgggc
gaaatgccggatgagcagcccgagctcattgccgcactggatgcgatgcgtgaggaagtg
gccgcgccgcgcgcgcaaggcgagctgaatgcgcggctggacagcatgttcgccgacgcg
gcgagcgcacctgcgcccgtcacggaagacgatctcgcggcgcgcctggacgccctgttc
acggacacctaccatgcgctgatcgccaatccgcctcccctgccggagcggggcagcgag
cttcgtcccacgccgcagctggcgaagcaggacgagcatatcgacgacctgttcaacgca
gccttcgatgacgccttcgccgagccgccgctgacgcaggtcgcccctccgccgctgcca
cagcagccggtcgccataccgccggtcgcggttccggcagcgccggagcctccgcccggc
ccgctcgaagcgctcggccttgagccgccatcggcccctgaacccgattacgctgccgcg
cccgaactggtcgccgccgagcccgatccggagatcgagctgctcgcgctgcccgccgcc
gaagcaaccctgtcggaaactgcgccctccgccatcggggacgatatcgaccccgacctg
ctgcccgtgttcctggaagagggcgccgacctgctgccgcaggtgggcgaaaccctgcgc
gcctggcacaacgccccggccgacacggcccacgcccacaccctgcagcgcatcctgcac
acggtgaaaggcagcgcgcgcatggccggggcgatgcgcctgggccagcacgcgcacgaa
atcgaaacgcacgtcgagaacatggtccacgcgggcagcgtgccgcagcaggccttcgac
gagctcatggcccattacgaccatgccctgctgctgttcgaacagctgcagaatccatcg
ccagtcgaagcgccgcaggccgaagaacagccggaggccgaggcaggcgaggccgccgat
gccgccgcgcggcagcctctggtccgcgtccgtgccgacctgctggaccgccttgtcaac
caggcaggtgaagtggccatcacccgttcgcgcctggaaaacgaggtgggcgtgctgcgc
acctcgctggcggacttccaggacaacctggcccgcctgcgccgccacctgcgcgaagtg
gaaatgcaggccgaaacccagattgcatcgcgcctctccatcgcgggcgaacgcgagttc
gatccgctggagttcgatcgcttcacccgcctgcaggaactgacccgcatgatggcggaa
agcgtcaacgacgtcgccgccttccacgaaggcctgatccgctctgtggacagcgcgagc
gacgatctcgcccagcaggcccgcatgacgcgcgagctccagcgcgacctgatgcgcgtg
cgcatggtgccctttgccagcatcgcagagcgcctcttccgcatcgcccgccagggcgcg
aaggaaatggacaagcgggtcaacctcgatatccggggcggcgccgtggagatggaccgc
ggtgtgctggagcgcatgtccgcgcccttcgaacaccttctgcgcaacgccatcgtgcac
ggtatcgaatcgcgcgaagagcgcagcgcccacggcaagcaggagaccggggaactgctg
gtggaggtaagccagcaaggcaatgaagtgatcctggagttcagcgacgatggtgcaggc
ctggacctggaccgcattcgcgcccgcgcccgcgagcgtggcctgagcggcgatgcggaa
ctgggcgatgccgacactgcgcagttgatcttcgagcccggcttctccacggcggacacg
ctgaccgaattggcgggacgcggcgtgggcatggatatcgtgcgtgctgaagcgtcggcg
ctgggcggccgggtggaaatctggaccgaacgcgggaagggtacgcgcttcaccatccat
ctgccgctcaccctcgccgtcacgcaggtggtgctgctggctgcgggagggaagacctac
gccattcccgccgtgctggtggagcaggtgttgcagatgaaggagggcgcgctggccgag
gcgtcggcgtccggtatgctcaccatgcagggccagagcgcagcgctgcactacctgcca
gcccttctgggcgacagcgccgcgcgcccattggcgcagcgctcgacgcccgtgctcctg
ctgcgcagcggcgcggaccgccaggccctgcacgtggacgagattctcggcaaccgcgaa
gtggtgatcaagaatatcggcccgcagctggcgcgcgtgcccggcattgcgggggccacg
gtgctcggctccggcgagatcgtgctgatactgaaccccgtggcgctggcccagcagccc
ggccgcgccgcgccttcggcgctgccgccggtgcaggcggagggcctgatcatggtggtg
gacgattcggtcaccgtgcgcaaggtcacccagcgcctgctggaacgcgagggctatgcc
gtcatgctggcgaaggatggtgtggatgcactggaacagatccaggaccgcaagccggac
ctcatgctggtggatatcgaaatgccgcgcatggacggtttcgacctcacccgccacatt
cgcggcggcgaggccacgaaggacatccccatcatcatgattacctcgcgcagcgcggac
aagcaccgcaactatgccatgcagctcggcgtgaacgcctatttcggcaagcccttccag
gagccgattctgctgggcgccattgcgggcctgctgcctaagcagccttga
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