Massilia endophytica: LSQ66_18000
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Entry
LSQ66_18000 CDS
T09693
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K02668
two-component system, NtrC family, sensor histidine kinase PilS [EC:
2.7.13.3
]
Organism
meny
Massilia endophytica
Pathway
meny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LSQ66_18000
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
meny01001
]
LSQ66_18000
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
meny02022
]
LSQ66_18000
02035 Bacterial motility proteins [BR:
meny02035
]
LSQ66_18000
Enzymes [BR:
meny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LSQ66_18000
Protein kinases [BR:
meny01001
]
Histidine kinases
NtrC family
LSQ66_18000
Two-component system [BR:
meny02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LSQ66_18000
Bacterial motility proteins [BR:
meny02035
]
Pilus system
Twitching motility proteins
LSQ66_18000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_2
PAS
PAS_8
MAP3K_TRAF_bd
HATPase_c_3
MLTR_LBD
Motif
Other DBs
NCBI-ProteinID:
UGQ45663
LinkDB
All DBs
Position
complement(3928808..3930490)
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AA seq
560 aa
AA seq
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MIARLPNLSAESRETFWRSLQTLNGTRVVIAVVLLAYLSFDPGSPRSASSFFNAQICAVY
LFLSVVFTLAAARWRRRFMLQLASQLACDLTVISLLYFGAGGVRSGLAILYLFPLAGCAI
LAPLMMALFAAAIASLFVLAEGSWRMLVSDGEMTVVQAGLYGAAFFAAVLVVNRMAARLI
GQEELAVQRGIEVGVQQAVNRLVMSHAGDGVIVLGASGEVYASNPAAQQMLGLTQSIADF
RLSDNPSLLPVALAYDEWRVNPAQSSAFITVKPFNDPALQEMTAAWSARRDVAVHLKVRF
AAADTAALGTERNVIFLQDVTAIENQAQQLKLASMGRLTASIAHEVRNPLSAIGHATSLM
AEDLKEPVHVRLLKIISDNVARVNRMVEDILQLSRKAQGHSEPLELERFLAELKAEFDDT
HGLAPEVLCLGGVARHTVRFDPLHLREVLLNLLNNAVRYASGKPESIRVFVVQARGRPLE
LHVQDDGPGISTEVRAHLFEPFYTTSSKGTGLGLYLARELCLNNEAMLDYEYRFDREVQP
DGSRKSSGRFVITFALPPSR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcgcgcctgcccaacctgtcggcggaatcgcgcgagaccttctggcgctcgctg
caaaccctgaacggcacgcgggtggtgattgcggtcgtgctgctggcctacctgagcttc
gatccggggagcccgcgctccgcgagcagcttcttcaacgcccagatctgcgcggtttat
cttttcctctccgtcgtatttacgctggctgccgcacgctggcgccgccgcttcatgctg
cagctggcctcccagctggcctgcgacctcacggtaatctcgctgctgtatttcggggca
gggggcgtgcgcagcggcctggccatcctctacctcttccccctggccggctgcgccatc
ctcgcgcccctgatgatggccctgttcgcggcggccatcgccagccttttcgtgctggcc
gaaggcagctggcgcatgctggtctccgatggcgaaatgacggtggtgcaggctggcctc
tacggcgcggccttcttcgccgccgtgctggtggtgaaccgcatggcggcgcggctgatc
ggccaggaggagctggccgtgcagcgcggcatcgaggtcggcgtgcagcaggcggtgaac
cggctggtgatgtcgcatgcgggcgatggcgtcatcgtcctgggcgccagcggcgaagtc
tatgccagcaacccggccgcccagcagatgctcggcctcacccagtccattgccgatttc
cgcctcagcgacaatccctcgctgctgccggtggccctggcctatgacgagtggcgcgtc
aatccggcccagtccagcgccttcatcaccgtgaagcctttcaacgatcccgcgctgcag
gagatgacggcggcatggagcgcgcggcgcgacgtggccgtgcacctgaaggtgcgcttc
gccgcagcggatacggcggccctgggcacggagcgcaacgtgatcttcctgcaggacgtg
acggccatcgagaatcaggcgcagcagctcaagctcgcctccatggggcggctcacggca
agcatcgcccacgaggtgcgcaatcccctgtccgccatcggccacgccacctccctcatg
gccgaggacctgaaggagccggtgcatgtgcgcctgctgaagatcatcagcgacaatgtg
gcgcgggtcaaccgcatggtggaggacatcctgcagctgtcgcgcaaggcgcaaggccac
agcgagcccctggagctggagcgcttcctggccgagctgaaggcggagttcgacgatacc
catggcctggcgccggaagtgctttgccttggcggcgtagcccgccacacggtgcgtttc
gatcccctgcatctgcgggaggtgctgctcaacctgctcaacaacgcggtgcgctacgcc
agcggcaagccggaaagcatccgcgtcttcgttgtgcaggcgcggggcaggccgctggag
ctgcacgtgcaggacgacggtcccggcatcagcaccgaggtgagggcccacctcttcgag
cctttctacaccacttccagcaagggcacgggccttggcctgtatctggcgcgggaactg
tgcttgaataacgaggccatgctggactacgaataccgcttcgaccgggaagtgcagccg
gacgggagccgcaagtccagcggccgttttgtgatcacttttgcactgccgccttcgcgc
tga
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