Massilia endophytica: LSQ66_18080
Help
Entry
LSQ66_18080 CDS
T09693
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
meny
Massilia endophytica
Pathway
meny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LSQ66_18080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meny03019
]
LSQ66_18080
Messenger RNA biogenesis [BR:
meny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LSQ66_18080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
GAIN_A
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UGQ45678
LinkDB
All DBs
Position
3946961..3947602
Genome browser
AA seq
213 aa
AA seq
DB search
MLDREGFRPNVGIILLNSHNEVWWGKRVREHSWQFPQGGIKYGETPEQAMYRELEEEIGL
KPEHVKIVGRTRDWLRYEVPDHFIKREIRGHYRGQKQIWFLLRMCARDCDVNLRVTDHPE
FDAWRWHEYWVPLDVVIEFKREVYQRALQELSRFLSWPPHGDRRHNSRYLRQPRNQPGTP
ANRQQPAKAAPQPAAPEAEPDCGEVRLAVPAKG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgggaagggtttcgccccaacgtcggcatcatcctgctcaactctcacaac
gaggtttggtggggcaagcgggtgcgcgagcactcgtggcagttcccgcaagggggtatc
aaatacggtgaaacgccggaacaggcgatgtaccgcgagctggaagaagagatcggacta
aagccggaacacgtcaagatcgtgggacgcacccgcgactggctgcgctatgaagtgccc
gaccatttcatcaagcgcgagatccgcggccattaccgtggccagaagcagatctggttc
ctgctgcgcatgtgcgcgcgcgattgcgacgtgaacctgcgcgtgaccgatcatcccgag
ttcgacgcctggcgctggcacgagtactgggtgccgctggacgtggtgatcgaattcaag
cgcgaggtctaccagcgcgcgctgcaggagctctcgcgtttcctgagctggccgccgcac
ggcgaccggcgccacaactcgcgctacctgcgccagcctcgcaaccagcccggcacgccc
gccaaccggcagcagcctgccaaggcagcgccgcagcctgcggcgcccgaagcggagccg
gactgcggcgaggtccgcctcgccgtgccggccaagggctga
DBGET
integrated database retrieval system
